Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AUNK_F_TYPEe2metA1 A: extended segmentsX: Transmembrane segment of lysosome-associated membrane glycoprotein 2 (From Topology)H: Transmembrane segment of lysosome-associated membrane glycoprotein 2 (From Topology)T: Transmembrane segment of lysosome-associated membrane glycoprotein 2F: UNK_F_TYPEECOD (1.6)
BUNK_F_TYPEe2metB1 A: extended segmentsX: Transmembrane segment of lysosome-associated membrane glycoprotein 2 (From Topology)H: Transmembrane segment of lysosome-associated membrane glycoprotein 2 (From Topology)T: Transmembrane segment of lysosome-associated membrane glycoprotein 2F: UNK_F_TYPEECOD (1.6)
CUNK_F_TYPEe2metC1 A: extended segmentsX: Transmembrane segment of lysosome-associated membrane glycoprotein 2 (From Topology)H: Transmembrane segment of lysosome-associated membrane glycoprotein 2 (From Topology)T: Transmembrane segment of lysosome-associated membrane glycoprotein 2F: UNK_F_TYPEECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C
PF17988VEGFR-2 Transmembrane domain (VEGFR-2_TMD)VEGFR-2 Transmembrane domainThis is a transmembrane domain (TMD) of vascular endothelial growth factor receptor 2 which regulates blood vessel homeostasis. Transmembrane signalling by receptor tyrosine kinases (RTKs) requires specific orientation of the intracellular kinase dom ...This is a transmembrane domain (TMD) of vascular endothelial growth factor receptor 2 which regulates blood vessel homeostasis. Transmembrane signalling by receptor tyrosine kinases (RTKs) requires specific orientation of the intracellular kinase domains in active receptor dimers. Two mutants in VEGFR-2 TMD showed constitutive kinase activity, suggesting that precise TMD orientation is mandatory for kinase activation. Scanning mutagenesis and structural analysis indicated that introducing two polar amino acids in distinct positions of the TMD (G770E/F777E and I771E/L778E mutations) reorients transmembrane helices and leads to stable dimer formation. Therefore, it has been suggested that the transition between the inactive and the active dimeric state of VEGFR-2 implicates alternative dimeric TMD conformations [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C
Vascular endothelial growth factor receptor 2

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, B, C
PharosP35968

Membrane Protein Annotation: OPM OPM Database Homepage

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage