2KL7

Solution NMR Structure of the EGF-like 1 Domain of Human Fibulin-4. Northeast Structural Genomics Target HR6275

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	EGF_CA_1	e2kl7A1	A: few secondary structure elements	X: EGF-like	H: Fibulin-4 EGF-like 1 domain (From Topology)	T: Fibulin-4 EGF-like 1 domain	F: EGF_CA_1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF07645	Calcium-binding EGF domain (EGF_CA)	Calcium-binding EGF domain	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Fibulin-4	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding structural molecule activity extracellular matrix structural constituent identical protein binding protein binding protein homodimerization activity protein dimerization activity heparin binding glycosaminoglycan binding cation binding ion binding binding calcium ion binding metal ion binding small molecule binding structural molecule activity extracellular matrix structural constituent identical protein binding protein binding protein homodimerization activity protein dimerization activity heparin binding glycosaminoglycan binding carbohydrate derivative binding sulfur compound binding	multicellular organismal process artery development smooth muscle tissue development muscle structure development multicellular organism development tube morphogenesis anatomical structure development animal organ morphogenesis muscle organ development muscle tissue development blood vessel development system development developmental process aorta smooth muscle tissue morphogenesis multicellular organismal process artery development smooth muscle tissue development muscle structure development multicellular organism development tube morphogenesis anatomical structure development animal organ morphogenesis muscle organ development muscle tissue development blood vessel development system development developmental process aorta smooth muscle tissue morphogenesis aorta morphogenesis blood vessel morphogenesis tube development animal organ development aorta development tissue development muscle tissue morphogenesis vasculature development circulatory system development anatomical structure morphogenesis tissue morphogenesis artery morphogenesis muscle organ morphogenesis regulation of biological process regulation of cellular process regulation of cell-substrate adhesion positive regulation of cell adhesion regulation of cell adhesion biological regulation positive regulation of biological process cell-substrate adhesion positive regulation of cell-matrix adhesion positive regulation of smooth muscle cell-matrix adhesion regulation of smooth muscle cell-matrix adhesion smooth muscle cell-matrix adhesion cell adhesion cell-matrix adhesion positive regulation of cell-substrate adhesion regulation of cell-matrix adhesion cellular process positive regulation of cellular process smooth muscle cell differentiation cellular developmental process cell development muscle cell differentiation vascular associated smooth muscle cell differentiation muscle cell development vascular associated smooth muscle cell development cell differentiation regulation of developmental process positive regulation of smooth muscle cell differentiation regulation of smooth muscle cell differentiation positive regulation of aortic smooth muscle cell differentiation regulation of cell differentiation regulation of aortic smooth muscle cell differentiation positive regulation of developmental process aortic smooth muscle cell differentiation positive regulation of cell differentiation positive regulation of vascular associated smooth muscle cell differentiation regulation of vascular associated smooth muscle cell differentiation positive regulation of muscle cell differentiation regulation of muscle cell differentiation regulation of cellular component organization collagen fibril organization extracellular matrix organization cellular component organization regulation of supramolecular fiber organization cellular component organization or biogenesis regulation of collagen fibril organization supramolecular fiber organization regulation of extracellular matrix organization extracellular structure organization external encapsulating structure organization elastic fiber assembly cellular component biogenesis cellular component assembly extracellular matrix assembly regulation of vascular associated smooth muscle cell proliferation negative regulation of cell population proliferation cell population proliferation regulation of smooth muscle cell proliferation negative regulation of biological process negative regulation of vascular associated smooth muscle cell proliferation smooth muscle cell proliferation negative regulation of smooth muscle cell proliferation regulation of cell population proliferation negative regulation of cellular process muscle cell proliferation vascular associated smooth muscle cell proliferation positive regulation of cellular component organization positive regulation of collagen fibril organization positive regulation of extracellular matrix organization positive regulation of supramolecular fiber organization	basement membrane cell periphery extracellular matrix external encapsulating structure collagen-containing extracellular matrix cellular anatomical entity extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle basement membrane cell periphery extracellular matrix external encapsulating structure collagen-containing extracellular matrix cellular anatomical entity extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle extracellular space vesicle extracellular membrane-bounded organelle elastic fiber supramolecular fiber supramolecular polymer supramolecular complex microfibril

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR018097	EGF-like calcium-binding, conserved site	Conserved Site
A	IPR026823	Complement Clr-like EGF domain	Domain
A	IPR013032	EGF-like, conserved site	Conserved Site
A	IPR000742	EGF-like domain	Domain
A	IPR009030	Growth factor receptor cysteine-rich domain superfamily	Homologous Superfamily
A	IPR001881	EGF-like calcium-binding domain	Domain
A	IPR000152	EGF-type aspartate/asparagine hydroxylation site	PTM

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: O95967	cutis laxa, autosomal recessive, type 1B cutis laxa psoriasis prostate cancer malignant glioma Marfan syndrome pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma adrenal cortex carcinoma systemic lupus erythematosus atypical teratoid rhabdoid tumor Congenital aneurysm of ascending aorta cutis laxa, autosomal recessive, type 1A glioblastoma lung carcinoma cutis laxa, autosomal recessive, type 1B cutis laxa psoriasis prostate cancer malignant glioma Marfan syndrome pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma adrenal cortex carcinoma systemic lupus erythematosus atypical teratoid rhabdoid tumor Congenital aneurysm of ascending aorta cutis laxa, autosomal recessive, type 1A glioblastoma lung carcinoma malignant mesothelioma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm skin basal cell carcinoma allergic rhinitis thoracic aortic aneurysm autosomal recessive cutis laxa type 1 Crohn disease Ehlers-Danlos syndrome inflammatory bowel disease malignant ependymoma malignant pancreatic neoplasm pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia subependymal giant cell astrocytoma atopic eczema breast carcinoma gastric carcinoma invasive ductal breast carcinoma

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.