2J56
X-ray reduced Paraccocus denitrificans methylamine dehydrogenase N- semiquinone in complex with amicyanin.
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Cupredoxins | 8035199 | 3000886 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Cupredoxins | 8035199 | 3000886 | SCOP2B (2022-06-29) |
C [auth H] | SCOP2B Superfamily | YVTN repeat-like/Quinoprotein amine dehydrogenase | 8042846 | 3001671 | SCOP2B (2022-06-29) |
D [auth J] | SCOP2B Superfamily | YVTN repeat-like/Quinoprotein amine dehydrogenase | 8042846 | 3001671 | SCOP2B (2022-06-29) |
E [auth L] | SCOP2B Superfamily | Methylamine dehydrogenase, L chain | 8041821 | 3000932 | SCOP2B (2022-06-29) |
F [auth M] | SCOP2B Superfamily | Methylamine dehydrogenase, L chain | 8041821 | 3000932 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Copper-bind | e2j56A1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Copper-bind | ECOD (1.6) |
B | Copper-bind | e2j56B1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: Copper-bind | ECOD (1.6) |
C [auth H] | Me-amine-dh_H | e2j56H1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Me-amine-dh_H | ECOD (1.6) |
D [auth J] | Me-amine-dh_H | e2j56J1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: Me-amine-dh_H | ECOD (1.6) |
E [auth L] | Me-amine-dh_L | e2j56L1 | A: few secondary structure elements | X: Methylamine dehydrogenase, L chain (From Topology) | H: Methylamine dehydrogenase, L chain (From Topology) | T: Methylamine dehydrogenase, L chain | F: Me-amine-dh_L | ECOD (1.6) |
F [auth M] | Me-amine-dh_L | e2j56M1 | A: few secondary structure elements | X: Methylamine dehydrogenase, L chain (From Topology) | H: Methylamine dehydrogenase, L chain (From Topology) | T: Methylamine dehydrogenase, L chain | F: Me-amine-dh_L | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
B | 2.60.40.420 | Mainly Beta | Sandwich | Immunoglobulin-like | Cupredoxins - blue copper proteins | CATH (4.3.0) |
C [auth H] | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
D [auth J] | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (4.3.0) |
E [auth L] | 2.60.30.10 | Mainly Beta | Sandwich | Electron Transport Ethylamine Dehydrogenase | Methylamine/Aralkylamine dehydrogenase light chain | CATH (4.3.0) |
F [auth M] | 2.60.30.10 | Mainly Beta | Sandwich | Electron Transport Ethylamine Dehydrogenase | Methylamine/Aralkylamine dehydrogenase light chain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00127 | Copper binding proteins, plastocyanin/azurin family (Copper-bind) | Copper binding proteins, plastocyanin/azurin family | - | Domain | |
C [auth H], D [auth J] | PF06433 | Methylamine dehydrogenase heavy chain (MADH) (Me-amine-dh_H) | Methylamine dehydrogenase heavy chain (MADH) | - | Repeat |
E [auth L], F [auth M] | PF02975 | Methylamine dehydrogenase, L chain (Me-amine-dh_L) | Methylamine dehydrogenase, L chain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
AMICYANIN | - | |||
C [auth H], D [auth J] | METHYLAMINE DEHYDROGENASE HEAVY CHAIN | |||
E [auth L], F [auth M] | METHYLAMINE DEHYDROGENASE LIGHT CHAIN |