2G3V

Crystal structure of CagS (HP0534, Cag13) from Helicobacter pylori

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyCagS-like8046011 4004821 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyCagS-like8092642 3002614 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyCagS-like8092642 3002614 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCagS-like8092642 3002614 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCagS-like8092642 3002614 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF16707e2g3vA1 A: alpha bundlesX: CAG pathogenicity island protein 13 (From Topology)H: CAG pathogenicity island protein 13 (From Topology)T: CAG pathogenicity island protein 13F: PF16707ECOD (1.6)
BPF16707e2g3vB1 A: alpha bundlesX: CAG pathogenicity island protein 13 (From Topology)H: CAG pathogenicity island protein 13 (From Topology)T: CAG pathogenicity island protein 13F: PF16707ECOD (1.6)
CPF16707e2g3vC1 A: alpha bundlesX: CAG pathogenicity island protein 13 (From Topology)H: CAG pathogenicity island protein 13 (From Topology)T: CAG pathogenicity island protein 13F: PF16707ECOD (1.6)
DPF16707e2g3vD1 A: alpha bundlesX: CAG pathogenicity island protein 13 (From Topology)H: CAG pathogenicity island protein 13 (From Topology)T: CAG pathogenicity island protein 13F: PF16707ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.120.1140 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CAG pathogenicity island protein 13, CagSCATH (4.3.0)
B1.20.120.1140 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CAG pathogenicity island protein 13, CagSCATH (4.3.0)
C1.20.120.1140 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CAG pathogenicity island protein 13, CagSCATH (4.3.0)
D1.20.120.1140 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CAG pathogenicity island protein 13, CagSCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF16707Cag pathogenicity island protein S of Helicobacter pylori (CagS)Cag pathogenicity island protein S of Helicobacter pylori- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR032020CAG pathogenicity island protein 13Family
A, B, C, D
IPR038306CagS superfamilyHomologous Superfamily