2EZV
Crystal structure of tetrameric restriction endonuclease SfiI bound to cognate DNA.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | Restriction endonuclease-like | 8102735 | 3000104 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2 Family | Restriction endonuclease SfiI | 8046534 | 4005133 | SCOP2 (2022-06-29) |
D [auth B] | SCOP2 Superfamily | Restriction endonuclease-like | 8102735 | 3000104 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | RestrictionSfiI | e2ezvA1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: RestrictionSfiI | ECOD (1.6) |
D [auth B] | RestrictionSfiI | e2ezvB1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: RestrictionSfiI | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 3.40.600.40 | Alpha Beta | 3-Layer(aba) Sandwich | ECO RV Endonuclease | Chain A | CATH (4.3.0) |
C [auth A] | 2.40.50.610 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Type II restriction enzyme SfiI, DNA-recognition domain | CATH (4.3.0) |
D [auth B] | 3.40.600.40 | Alpha Beta | 3-Layer(aba) Sandwich | ECO RV Endonuclease | Chain A | CATH (4.3.0) |
D [auth B] | 2.40.50.610 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Type II restriction enzyme SfiI, DNA-recognition domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], D [auth B] | PF11487 | Type II restriction enzyme SfiI (RestrictionSfiI) | Type II restriction enzyme SfiI | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], D [auth B] | IPR021580 | Type II restriction enzyme SfiI | Family |
C [auth A], D [auth B] | IPR043117 | Restriction endonuclease, type II SfiI, domain 2 | Homologous Superfamily |
C [auth A], D [auth B] | IPR043118 | Restriction endonuclease, type II SfiI, domain 1 | Homologous Superfamily |