2ASH
Crystal structure of Queuine tRNA-ribosyltransferase (EC 2.4.2.29) (tRNA-guanine (tm1561) from THERMOTOGA MARITIMA at 1.90 A resolution
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2asha_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | tRNA-guanine transglycosylase | tRNA-guanine transglycosylase | Queosine tRNA-guanine transglycosylase | (Thermotoga maritima ) [TaxId: 2336 ], | SCOPe (2.08) |
B | d2ashb_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | tRNA-guanine transglycosylase | tRNA-guanine transglycosylase | Queosine tRNA-guanine transglycosylase | (Thermotoga maritima ) [TaxId: 2336 ], | SCOPe (2.08) |
C | d2ashc_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | tRNA-guanine transglycosylase | tRNA-guanine transglycosylase | Queosine tRNA-guanine transglycosylase | (Thermotoga maritima ) [TaxId: 2336 ], | SCOPe (2.08) |
D | d2ashd_ | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | tRNA-guanine transglycosylase | tRNA-guanine transglycosylase | Queosine tRNA-guanine transglycosylase | (Thermotoga maritima ) [TaxId: 2336 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | tRNA-guanine transglycosylase | 8079675 | 3000635 | SCOP2B (2022-06-29) |
B | SCOP2 Family | tRNA-guanine transglycosylase | 8079674 | 4003338 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | tRNA-guanine transglycosylase | 8079675 | 3000635 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | tRNA-guanine transglycosylase | 8079675 | 3000635 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | tRNA-guanine transglycosylase | 8079675 | 3000635 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | TGT | e2ashA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: TGT | ECOD (1.6) |
B | TGT | e2ashB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: TGT | ECOD (1.6) |
C | TGT | e2ashC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: TGT | ECOD (1.6) |
D | TGT | e2ashD1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: TGT | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.105 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Queuine tRNA-ribosyltransferase-like | CATH (4.3.0) |
B | 3.20.20.105 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Queuine tRNA-ribosyltransferase-like | CATH (4.3.0) |
C | 3.20.20.105 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Queuine tRNA-ribosyltransferase-like | CATH (4.3.0) |
D | 3.20.20.105 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Queuine tRNA-ribosyltransferase-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036511 | Queuine tRNA-ribosyltransferase-like | Homologous Superfamily | |
IPR004803 | tRNA-guanine transglycosylase | Family | |
IPR050076 | Archaeosine Synthase Type 1/Queuine TRNA-Ribosyltransferase | Family | |
IPR002616 | tRNA-guanine(15) transglycosylase-like | Domain |