1PVE
Solution structure of XPC binding domain of hHR23B
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1pvea1 | All alpha proteins | XPC-binding domain-like | XPC-binding domain | XPC-binding domain | XPC-binding domain of Rad23 homolog B (Hhr23b) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d1pvea2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.540 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | XPC-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09280 | XPC-binding domain (XPC-binding) | XPC-binding domain | Members of this family adopt a structure consisting of four alpha helices, arranged in an array. They bind specifically and directly to the xeroderma pigmentosum group C protein (XPC) to initiate nucleotide excision repair [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR004806 | UV excision repair protein Rad23 | Family | |
IPR036353 | XPC-binding domain superfamily | Homologous Superfamily | |
IPR015360 | XPC-binding domain | Domain | |
IPR015940 | Ubiquitin-associated domain | Domain | |
IPR041811 | RAD23A/RAD23B, UBA1 domain | Domain | |
IPR000626 | Ubiquitin-like domain | Domain | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR009060 | UBA-like superfamily | Homologous Superfamily | |
IPR006636 | Heat shock chaperonin-binding | Domain |