1Z9O
1.9 Angstrom Crystal Structure of the Rat VAP-A MSP Homology Domain in Complex with the Rat ORP1 FFAT Motif
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | PapD-like | 8061620 | 3002067 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | PapD-like | 8061620 | 3002067 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | PapD-like | 8061620 | 3002067 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | PapD-like | 8061620 | 3002067 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | PapD-like | 8061620 | 3002067 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | PapD-like | 8061620 | 3002067 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Motile_Sperm | e1z9oA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Motile_Sperm | ECOD (1.6) |
B | Motile_Sperm | e1z9oB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Motile_Sperm | ECOD (1.6) |
C | Motile_Sperm | e1z9oC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Motile_Sperm | ECOD (1.6) |
D | Motile_Sperm | e1z9oD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Motile_Sperm | ECOD (1.6) |
E | Motile_Sperm | e1z9oE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Motile_Sperm | ECOD (1.6) |
F | Motile_Sperm | e1z9oF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Motile_Sperm | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
C | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
D | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
E | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
F | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008962 | PapD-like superfamily | Homologous Superfamily | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR000535 | Major sperm protein (MSP) domain | Domain | |
IPR016763 | Vesicle-associated membrane-protein-associated protein | Family | |
IPR002110 | Ankyrin repeat | Repeat | |
IPR001849 | Pleckstrin homology domain | Domain | |
IPR018494 | Oxysterol-binding protein, conserved site | Conserved Site | |
IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily | |
IPR037239 | Oxysterol-binding protein superfamily | Homologous Superfamily | |
IPR000648 | Oxysterol-binding protein | Family | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily |