1YA6

alpha-glucosyltransferase in complex with UDP and a 13-mer DNA containing a central A:G mismatch

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C [auth A]	SCOP2B Superfamily	Type B glycosyltransferase-like	8101825	3001586	SCOP2B (2022-06-29)
D [auth B]	SCOP2B Superfamily	Type B glycosyltransferase-like	8101825	3001586	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth A]	AGT_N	e1ya6A2	A: a/b three-layered sandwiches	X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)	H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)	T: UDP-Glycosyltransferase/glycogen phosphorylase	F: AGT_N	ECOD (1.6)
C [auth A]	AGT_C	e1ya6A1	A: a/b three-layered sandwiches	X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)	H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)	T: UDP-Glycosyltransferase/glycogen phosphorylase	F: AGT_C	ECOD (1.6)
D [auth B]	AGT_N	e1ya6B1	A: a/b three-layered sandwiches	X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)	H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)	T: UDP-Glycosyltransferase/glycogen phosphorylase	F: AGT_N	ECOD (1.6)
D [auth B]	AGT_C	e1ya6B2	A: a/b three-layered sandwiches	X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)	H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology)	T: UDP-Glycosyltransferase/glycogen phosphorylase	F: AGT_C	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C [auth A]	3.40.50.2000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycogen Phosphorylase B	CATH (4.3.0)
D [auth B]	3.40.50.2000	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycogen Phosphorylase B	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth A], D [auth B]	PF11440	DNA alpha-glucosyltransferase (AGT)	DNA alpha-glucosyltransferase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C]	5'-D(APTPAPCPTPAPAPGPAPTPAPG)-3'	-	-	-
B [auth D]	5'-D(CPTPAPTPCPTPGPAPGPTPAPT)-3'	-	-	-
C [auth A], D [auth B]	DNA alpha-glucosyltransferase	glycosyltransferase activity DNA alpha-glucosyltransferase activity catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid transferase activity glucosyltransferase activity hexosyltransferase activity catalytic activity	symbiont-mediated perturbation of host defense response response to host defenses biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host immune response symbiont-mediated evasion of recognition by host innate immune effector response to defenses of other organism symbiont-mediated evasion of host innate immune response response to external stimulus symbiont-mediated evasion of host restriction-modification system response to biotic stimulus biological process involved in interaction with host biological process involved in symbiotic interaction evasion of host immune response symbiont-mediated perturbation of host defense response response to host defenses biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host immune response symbiont-mediated evasion of recognition by host innate immune effector response to defenses of other organism symbiont-mediated evasion of host innate immune response response to external stimulus symbiont-mediated evasion of host restriction-modification system response to biotic stimulus biological process involved in interaction with host biological process involved in symbiotic interaction evasion of host immune response modulation by symbiont of host process response to host immune response response to host response to external biotic stimulus modulation of process of another organism symbiont-mediated suppression of host CRISPR-cas system symbiont-mediated perturbation of host defenses symbiont-mediated suppression of host immune response symbiont-mediated suppression of host innate immune response symbiont-mediated suppression of host defenses symbiont-mediated perturbation of host innate immune response nucleobase-containing compound metabolic process organic cyclic compound metabolic process DNA modification organic substance metabolic process macromolecule modification metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth A], D [auth B]	IPR016223	DNA alpha-glucosyltransferase	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.