1XPA
SOLUTION STRUCTURE OF THE DNA-AND RPA-BINDING DOMAIN OF THE HUMAN REPAIR FACTOR XPA, NMR, 1 STRUCTURE
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1xpaa1 | All alpha proteins | Putative DNA-binding domain | Putative DNA-binding domain | DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain | DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A | d1xpaa2 | Small proteins | Glucocorticoid receptor-like (DNA-binding domain) | Glucocorticoid receptor-like (DNA-binding domain) | DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain | DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain | 8024307 | 4000763 | SCOP2 (2022-06-29) |
A | SCOP2 Family | DNA repair factor XPA DNA- and RPA-binding domain, N-terminal subdomain | 8026701 | 4003640 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | beta-hairpin DNA-binding domain-like | 8036686 | 3002139 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8039080 | 3000068 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | XPA_C | e1xpaA3 | A: alpha arrays | X: HTH | H: HTH | T: Putative DNA-binding domain | F: XPA_C | ECOD (1.6) |
A | XPA_N | e1xpaA2 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: XPA_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.90.530.10 | Alpha Beta | Alpha-Beta Complex | Nucleotide Excision Repair Protein XPA (XPA-MBD) | B Chain A | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01286 | XPA protein N-terminal (XPA_N) | XPA protein N-terminal | - | Domain | |
PF05181 | XPA protein C-terminus (XPA_C) | XPA protein C-terminus | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR022658 | XPA, conserved site | Conserved Site | |
IPR009061 | Putative DNA-binding domain superfamily | Homologous Superfamily | |
IPR022656 | XPA, C-terminal | Domain | |
IPR022652 | Zinc finger, XPA-type, conserved site | Conserved Site | |
IPR000465 | XPA/RAD14 | Family | |
IPR037129 | XPA domain superfamily | Homologous Superfamily |