1VMH

Crystal structure of an uncharacterized conserved protein yjbq/upf0047 family, ortholog yugu b.subtilis (ca_c0907) from clostridium acetobutylicum at 1.31 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1vmha_	Alpha and beta proteins (a+b)	YjbQ-like	YjbQ-like	YjbQ-like	B.subtilis YugU ortolog CAC0907	(Clostridium acetobutylicum ) [TaxId: 1488 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	YjbQ-like	8030708	4002602	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YjbQ-like	8043087	3001472	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	UPF0047	e1vmhA1	A: a+b two layers	X: YjbQ-like (Pfam 01894) (From Topology)	H: YjbQ-like (Pfam 01894) (From Topology)	T: YjbQ-like (Pfam 01894)	F: UPF0047	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.120.460	Mainly Beta	Sandwich	Jelly Rolls	YjbQ-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01894	Uncharacterised protein family UPF0047 (UPF0047)	Uncharacterised protein family UPF0047	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR035917	YjbQ-like superfamily	Homologous Superfamily
A	IPR001602	UPF0047 protein YjbQ-like	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.