1NEE
Structure of archaeal translation factor aIF2beta from Methanobacterium thermoautrophicum
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1neea1 | Alpha and beta proteins (a+b) | Ribosome binding domain-like | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | (Methanothermobacter thermautotrophicus ) [TaxId: 145262 ], | SCOPe (2.08) |
A | d1neea2 | Small proteins | Zinc-binding domain of translation initiation factor 2 beta | Zinc-binding domain of translation initiation factor 2 beta | Zinc-binding domain of translation initiation factor 2 beta | Zinc-binding domain of translation initiation factor 2 beta | (Methanothermobacter thermautotrophicus ) [TaxId: 145262 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 8024416 | 4000606 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Zinc-binding domain of translation initiation factor 2 beta | 8024418 | 4002948 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Translation initiation factor 2 beta, aIF2beta, N-terminal domain | 8036795 | 3000730 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Zinc-binding domain of translation initiation factor 2 beta | 8036797 | 3001931 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | eIF-5_eIF-2B_N | e1neeA1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: eIF-5_eIF-2B_N | ECOD (1.6) |
A | eIF-5_eIF-2B_C | e1neeA2 | A: few secondary structure elements | X: Rubredoxin-like | H: Zinc-binding domain of translation initiation factor 2 beta (From Topology) | T: Zinc-binding domain of translation initiation factor 2 beta | F: eIF-5_eIF-2B_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.3150 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01873 | Domain found in IF2B/IF5 (eIF-5_eIF-2B) | Domain found in IF2B/IF5 | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016190 | Translation initiation factor IF2/IF5, zinc-binding | Homologous Superfamily | |
IPR002735 | Translation initiation factor IF2/IF5 domain | Domain | |
IPR016189 | Translation initiation factor IF2/IF5, N-terminal | Homologous Superfamily | |
IPR004458 | Translation initiation factor 2, beta subunit | Family | |
IPR045196 | Translation initiation factor IF2/IF5 | Family |