Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1jc5a_ Alpha and beta proteins (a+b) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Methylmalonyl-CoA epimerase Methylmalonyl-CoA epimerase (Propionibacterium freudenreichii subsp. shermanii ) [TaxId: 1752 ], SCOPe (2.08)
Bd1jc5b_ Alpha and beta proteins (a+b) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Methylmalonyl-CoA epimerase Methylmalonyl-CoA epimerase (Propionibacterium freudenreichii subsp. shermanii ) [TaxId: 1752 ], SCOPe (2.08)
Cd1jc5c_ Alpha and beta proteins (a+b) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Methylmalonyl-CoA epimerase Methylmalonyl-CoA epimerase (Propionibacterium freudenreichii subsp. shermanii ) [TaxId: 1752 ], SCOPe (2.08)
Dd1jc5d_ Alpha and beta proteins (a+b) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Methylmalonyl-CoA epimerase Methylmalonyl-CoA epimerase (Propionibacterium freudenreichii subsp. shermanii ) [TaxId: 1752 ], SCOPe (2.08)
Ed1jc5e_ Alpha and beta proteins (a+b) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Methylmalonyl-CoA epimerase Methylmalonyl-CoA epimerase (Propionibacterium freudenreichii subsp. shermanii ) [TaxId: 1752 ], SCOPe (2.08)
Fd1jc5f_ Alpha and beta proteins (a+b) Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Methylmalonyl-CoA epimerase Methylmalonyl-CoA epimerase (Propionibacterium freudenreichii subsp. shermanii ) [TaxId: 1752 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyGlyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8034325 3000739 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGlyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8034325 3000739 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyGlyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8034325 3000739 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyGlyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8034325 3000739 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyGlyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8034325 3000739 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyGlyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 8034325 3000739 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AGlyoxalase_7e1jc5A1 A: a+b two layersX: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseF: Glyoxalase_7ECOD (1.6)
AGlyoxalase_4e1jc5A2 A: a+b two layersX: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseF: Glyoxalase_4ECOD (1.6)
BGlyoxalase_7e1jc5B1 A: a+b two layersX: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseF: Glyoxalase_7ECOD (1.6)
BGlyoxalase_4e1jc5B2 A: a+b two layersX: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseF: Glyoxalase_4ECOD (1.6)
CGlyoxalase_7e1jc5C1 A: a+b two layersX: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseF: Glyoxalase_7ECOD (1.6)
CGlyoxalase_4e1jc5C2 A: a+b two layersX: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseF: Glyoxalase_4ECOD (1.6)
DGlyoxalase_7e1jc5D1 A: a+b two layersX: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseF: Glyoxalase_7ECOD (1.6)
DGlyoxalase_4e1jc5D2 A: a+b two layersX: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseF: Glyoxalase_4ECOD (1.6)
EGlyoxalase_7e1jc5E1 A: a+b two layersX: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseF: Glyoxalase_7ECOD (1.6)
EGlyoxalase_4e1jc5E2 A: a+b two layersX: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseF: Glyoxalase_4ECOD (1.6)
FGlyoxalase_7e1jc5F1 A: a+b two layersX: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseF: Glyoxalase_7ECOD (1.6)
FGlyoxalase_4e1jc5F2 A: a+b two layersX: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)H: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase (From Topology)T: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenaseF: Glyoxalase_4ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.10.180.10 Alpha Beta Roll 2,3-Dihydroxybiphenyl 1,2-Dioxygenase domain 1CATH (4.3.0)
B3.10.180.10 Alpha Beta Roll 2,3-Dihydroxybiphenyl 1,2-Dioxygenase domain 1CATH (4.3.0)
C3.10.180.10 Alpha Beta Roll 2,3-Dihydroxybiphenyl 1,2-Dioxygenase domain 1CATH (4.3.0)
D3.10.180.10 Alpha Beta Roll 2,3-Dihydroxybiphenyl 1,2-Dioxygenase domain 1CATH (4.3.0)
E3.10.180.10 Alpha Beta Roll 2,3-Dihydroxybiphenyl 1,2-Dioxygenase domain 1CATH (4.3.0)
F3.10.180.10 Alpha Beta Roll 2,3-Dihydroxybiphenyl 1,2-Dioxygenase domain 1CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF13669Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily (Glyoxalase_4)Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily- Family

InterPro: Protein Family Classification InterPro Database Homepage

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
methylmalonyl-CoA epimerase  M-CSA #33

Methylmalonyl-CoA epimerase is essential for the breakdown of odd-numbered fatty acids and the amino acids valine, isoleucine and methionine. It is present in many species of bacteria and animals. Defective activity in humans can result in severe acidosis and damage to the central nervous system.

Defined by 5 residues: HIS:A-12GLU:A-48GLN:A-65HIS:A-91GLU:A-141
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