1HJB
CRYSTAL STRUCTURE OF RUNX-1/AML1/CBFALPHA RUNT DOMAIN AND C/EBPBETA BZIP HOMODIMER BOUND TO A DNA FRAGMENT FROM THE CSF-1R PROMOTER
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Leucine zipper-like | 8044461 | 3001609 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Leucine zipper-like | 8044461 | 3001609 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Leucine zipper-like | 8044461 | 3001609 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Leucine zipper-like | 8044461 | 3001609 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | p53-like transcription factors | 8042175 | 3000758 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | p53-like transcription factors | 8042175 | 3000758 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | Runt | e1hjbC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: Runt | ECOD (1.6) |
F | Runt | e1hjbF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: Runt | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.20.5.170 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
A | 1.20.5.170 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
D | 1.20.5.170 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
E | 1.20.5.170 | Mainly Alpha | Up-down Bundle | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
C | 2.60.40.720 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
F | 2.60.40.720 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07716 | Basic region leucine zipper (bZIP_2) | Basic region leucine zipper | - | Coiled-coil | |
PF00853 | Runt domain (Runt) | Runt domain | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR031106 | CCAAT/enhancer-binding protein C/EBP | Family | |
IPR004827 | Basic-leucine zipper domain | Domain | |
IPR016468 | CCAAT/enhancer-binding protein, chordates | Family | |
IPR046347 | Basic-leucine zipper domain superfamily | Homologous Superfamily | |
IPR012346 | p53/RUNT-type transcription factor, DNA-binding domain superfamily | Homologous Superfamily | |
IPR013524 | Runt domain | Domain | |
IPR016554 | Runt-related transcription factor RUNX | Family | |
IPR008967 | p53-like transcription factor, DNA-binding domain superfamily | Homologous Superfamily | |
IPR000040 | Acute myeloid leukemia 1 protein (AML1)/Runt | Family | |
IPR027384 | Runx, central domain superfamily | Homologous Superfamily | |
IPR013711 | Runx, C-terminal domain | Domain |