Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1gtha1 All alpha proteins Globin-like alpha-helical ferredoxin Dihydropyrimidine dehydrogenase, N-terminal domain Dihydropyrimidine dehydrogenase, N-terminal domain PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Ad1gtha2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Dihydropyrimidine dehydrogenase, domain 4 PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Ad1gtha3 Alpha and beta proteins (a/b) FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain C-terminal domain of adrenodoxin reductase-like Dihydropyrimidine dehydrogenase, domain 3 PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Ad1gtha4 Alpha and beta proteins (a/b) Nucleotide-binding domain Nucleotide-binding domain N-terminal domain of adrenodoxin reductase-like Dihydropyrimidine dehydrogenase, domain 2 PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Ad1gtha5 Alpha and beta proteins (a+b) Ferredoxin-like 4Fe-4S ferredoxins Ferredoxin domains from multidomain proteins Dihydropyrimidine dehydrogenase, C-terminal domain PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Bd1gthb1 All alpha proteins Globin-like alpha-helical ferredoxin Dihydropyrimidine dehydrogenase, N-terminal domain Dihydropyrimidine dehydrogenase, N-terminal domain PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Bd1gthb2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Dihydropyrimidine dehydrogenase, domain 4 PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Bd1gthb3 Alpha and beta proteins (a/b) FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain C-terminal domain of adrenodoxin reductase-like Dihydropyrimidine dehydrogenase, domain 3 PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Bd1gthb4 Alpha and beta proteins (a/b) Nucleotide-binding domain Nucleotide-binding domain N-terminal domain of adrenodoxin reductase-like Dihydropyrimidine dehydrogenase, domain 2 PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Bd1gthb5 Alpha and beta proteins (a+b) Ferredoxin-like 4Fe-4S ferredoxins Ferredoxin domains from multidomain proteins Dihydropyrimidine dehydrogenase, C-terminal domain PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Cd1gthc1 All alpha proteins Globin-like alpha-helical ferredoxin Dihydropyrimidine dehydrogenase, N-terminal domain Dihydropyrimidine dehydrogenase, N-terminal domain PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Cd1gthc2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Dihydropyrimidine dehydrogenase, domain 4 PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Cd1gthc3 Alpha and beta proteins (a/b) FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain C-terminal domain of adrenodoxin reductase-like Dihydropyrimidine dehydrogenase, domain 3 PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Cd1gthc4 Alpha and beta proteins (a/b) Nucleotide-binding domain Nucleotide-binding domain N-terminal domain of adrenodoxin reductase-like Dihydropyrimidine dehydrogenase, domain 2 PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Cd1gthc5 Alpha and beta proteins (a+b) Ferredoxin-like 4Fe-4S ferredoxins Ferredoxin domains from multidomain proteins Dihydropyrimidine dehydrogenase, C-terminal domain PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Dd1gthd1 All alpha proteins Globin-like alpha-helical ferredoxin Dihydropyrimidine dehydrogenase, N-terminal domain Dihydropyrimidine dehydrogenase, N-terminal domain PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Dd1gthd2 Alpha and beta proteins (a/b) TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Dihydropyrimidine dehydrogenase, domain 4 PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Dd1gthd3 Alpha and beta proteins (a/b) FAD/NAD(P)-binding domain FAD/NAD(P)-binding domain C-terminal domain of adrenodoxin reductase-like Dihydropyrimidine dehydrogenase, domain 3 PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Dd1gthd4 Alpha and beta proteins (a/b) Nucleotide-binding domain Nucleotide-binding domain N-terminal domain of adrenodoxin reductase-like Dihydropyrimidine dehydrogenase, domain 2 PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)
Dd1gthd5 Alpha and beta proteins (a+b) Ferredoxin-like 4Fe-4S ferredoxins Ferredoxin domains from multidomain proteins Dihydropyrimidine dehydrogenase, C-terminal domain PIG (Sus scrofa ) [TaxId: 9823 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyFMN-linked oxidoreductases 8001523 3000014 SCOP2B (2022-06-29)
ASCOP2B Superfamilyalpha-helical ferredoxin 8001521 3000026 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyThioredoxin reductase-like 8017506 3000050 SCOP2B (2022-06-29)
ASCOP2B Superfamily4Fe-4S ferredoxins 8001525 3000020 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyFMN-linked oxidoreductases 8001523 3000014 SCOP2B (2022-06-29)
BSCOP2B Superfamilyalpha-helical ferredoxin 8001521 3000026 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyThioredoxin reductase-like 8017506 3000050 SCOP2B (2022-06-29)
BSCOP2B Superfamily4Fe-4S ferredoxins 8001525 3000020 SCOP2B (2022-06-29)
CSCOP2B Superfamily4Fe-4S ferredoxins 8001525 3000020 SCOP2B (2022-06-29)
CSCOP2B Superfamilyalpha-helical ferredoxin 8001521 3000026 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyFMN-linked oxidoreductases 8001523 3000014 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyThioredoxin reductase-like 8017506 3000050 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyFMN-linked oxidoreductases 8001523 3000014 SCOP2B (2022-06-29)
DSCOP2B Superfamilyalpha-helical ferredoxin 8001521 3000026 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyThioredoxin reductase-like 8017506 3000050 SCOP2B (2022-06-29)
DSCOP2B Superfamily4Fe-4S ferredoxins 8001525 3000020 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AFer4_20e1gthA1 A: alpha arraysX: alpha-helical ferredoxin-likeH: alpha-helical ferredoxin (From Topology)T: alpha-helical ferredoxinF: Fer4_20ECOD (1.6)
AFer4_21e1gthA2 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21ECOD (1.6)
ADHO_dhe1gthA3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: DHO_dhECOD (1.6)
APyr_redox_2_3e1gthA4 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: Pyr_redox_2_3ECOD (1.6)
APyr_redox_2e1gthA5 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Nucleotide-binding domainF: Pyr_redox_2ECOD (1.6)
BFer4_20e1gthB1 A: alpha arraysX: alpha-helical ferredoxin-likeH: alpha-helical ferredoxin (From Topology)T: alpha-helical ferredoxinF: Fer4_20ECOD (1.6)
BFer4_21e1gthB2 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21ECOD (1.6)
BDHO_dhe1gthB3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: DHO_dhECOD (1.6)
BPyr_redox_2_3e1gthB4 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: Pyr_redox_2_3ECOD (1.6)
BPyr_redox_2e1gthB5 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Nucleotide-binding domainF: Pyr_redox_2ECOD (1.6)
CFer4_20e1gthC1 A: alpha arraysX: alpha-helical ferredoxin-likeH: alpha-helical ferredoxin (From Topology)T: alpha-helical ferredoxinF: Fer4_20ECOD (1.6)
CFer4_21e1gthC2 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21ECOD (1.6)
CDHO_dhe1gthC3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: DHO_dhECOD (1.6)
CPyr_redox_2_3e1gthC4 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: Pyr_redox_2_3ECOD (1.6)
CPyr_redox_2e1gthC5 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Nucleotide-binding domainF: Pyr_redox_2ECOD (1.6)
DFer4_20e1gthD1 A: alpha arraysX: alpha-helical ferredoxin-likeH: alpha-helical ferredoxin (From Topology)T: alpha-helical ferredoxinF: Fer4_20ECOD (1.6)
DFer4_21e1gthD2 A: a+b two layersX: 4Fe-4S ferredoxin (From Topology)H: 4Fe-4S ferredoxin (From Topology)T: 4Fe-4S ferredoxinF: Fer4_21ECOD (1.6)
DDHO_dhe1gthD3 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: DHO_dhECOD (1.6)
DPyr_redox_2_3e1gthD4 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: FAD/NAD(P)-binding domainF: Pyr_redox_2_3ECOD (1.6)
DPyr_redox_2e1gthD5 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Nucleotide-binding domainF: Pyr_redox_2ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.70.20 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
A1.10.1060.10 Mainly Alpha Orthogonal Bundle Fumarate Reductase Iron-sulfur Protein Chain B, domain 2CATH (4.3.0)
A3.50.50.60 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain FAD/NAD(P)-binding domainCATH (4.3.0)
A3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
B3.30.70.20 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
B1.10.1060.10 Mainly Alpha Orthogonal Bundle Fumarate Reductase Iron-sulfur Protein Chain B, domain 2CATH (4.3.0)
B3.50.50.60 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain FAD/NAD(P)-binding domainCATH (4.3.0)
B3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
C3.30.70.20 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
C1.10.1060.10 Mainly Alpha Orthogonal Bundle Fumarate Reductase Iron-sulfur Protein Chain B, domain 2CATH (4.3.0)
C3.50.50.60 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain FAD/NAD(P)-binding domainCATH (4.3.0)
C3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)
D3.30.70.20 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
D1.10.1060.10 Mainly Alpha Orthogonal Bundle Fumarate Reductase Iron-sulfur Protein Chain B, domain 2CATH (4.3.0)
D3.50.50.60 Alpha Beta 3-Layer(bba) Sandwich FAD/NAD(P)-binding domain FAD/NAD(P)-binding domainCATH (4.3.0)
D3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF07992Pyridine nucleotide-disulphide oxidoreductase (Pyr_redox_2)Pyridine nucleotide-disulphide oxidoreductaseThis family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.Domain
A, B, C, D
PF01180Dihydroorotate dehydrogenase (DHO_dh)Dihydroorotate dehydrogenase- Domain
A, B, C, D
PF14691Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster (Fer4_20)Dihydroprymidine dehydrogenase domain II, 4Fe-4S clusterDomain II of the enzyme dihydroprymidine dehydrogenase binds FAD. Dihydroprymidine dehydrogenase catalyses the first and rate-limiting step of pyrimidine degradation by converting pyrimidines to the corresponding 5,6- dihydro compounds [1]. This doma ...Domain II of the enzyme dihydroprymidine dehydrogenase binds FAD. Dihydroprymidine dehydrogenase catalyses the first and rate-limiting step of pyrimidine degradation by converting pyrimidines to the corresponding 5,6- dihydro compounds [1]. This domain carries two Fe4-S4 clusters.
Domain
A, B, C, D
PF146974Fe-4S dicluster domain (Fer4_21)4Fe-4S dicluster domainSuperfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
DIHYDROPYRIMIDINE DEHYDROGENASE