1FSJ
CRYSTAL STRUCTURE OF THE E9 DNASE DOMAIN
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d1fsjb_ | Alpha and beta proteins (a+b) | His-Me finger endonucleases | His-Me finger endonucleases | HNH-motif | DNase domain of colicin E9 | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B [auth C] | d1fsjc_ | Alpha and beta proteins (a+b) | His-Me finger endonucleases | His-Me finger endonucleases | HNH-motif | DNase domain of colicin E9 | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
C [auth D] | d1fsjd_ | Alpha and beta proteins (a+b) | His-Me finger endonucleases | His-Me finger endonucleases | HNH-motif | DNase domain of colicin E9 | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
D [auth E] | d1fsje_ | Alpha and beta proteins (a+b) | His-Me finger endonucleases | His-Me finger endonucleases | HNH-motif | DNase domain of colicin E9 | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | His-Me finger endonucleases | 8042111 | 3001893 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | His-Me finger endonucleases | 8042111 | 3001893 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | His-Me finger endonucleases | 8042111 | 3001893 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | His-Me finger endonucleases | 8042111 | 3001893 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | LHH | e1fsjB1 | A: few secondary structure elements | X: His-Me finger endonucleases (From Homology) | H: His-Me finger endonucleases | T: His-Me finger endonucleases | F: LHH | ECOD (1.6) |
B [auth C] | LHH | e1fsjC1 | A: few secondary structure elements | X: His-Me finger endonucleases (From Homology) | H: His-Me finger endonucleases | T: His-Me finger endonucleases | F: LHH | ECOD (1.6) |
C [auth D] | LHH | e1fsjD1 | A: few secondary structure elements | X: His-Me finger endonucleases (From Homology) | H: His-Me finger endonucleases | T: His-Me finger endonucleases | F: LHH | ECOD (1.6) |
D [auth E] | LHH | e1fsjE1 | A: few secondary structure elements | X: His-Me finger endonucleases (From Homology) | H: His-Me finger endonucleases | T: His-Me finger endonucleases | F: LHH | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 3.90.540.10 | Alpha Beta | Alpha-Beta Complex | Colicin E7 immunity protein | Chain B, fragment: Endonuclease domain | CATH (4.3.0) |
B [auth C] | 3.90.540.10 | Alpha Beta | Alpha-Beta Complex | Colicin E7 immunity protein | Chain B, fragment: Endonuclease domain | CATH (4.3.0) |
C [auth D] | 3.90.540.10 | Alpha Beta | Alpha-Beta Complex | Colicin E7 immunity protein | Chain B, fragment: Endonuclease domain | CATH (4.3.0) |
D [auth E] | 3.90.540.10 | Alpha Beta | Alpha-Beta Complex | Colicin E7 immunity protein | Chain B, fragment: Endonuclease domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth C], C [auth D], D [auth E] | PF21431 | Colicin/Pyocin-S2, DNase domain (Col-Pyo_DNase) | Colicin/Pyocin-S2, DNase domain | This entry represents the DNAse domain from colicin/pyocin bacteriocins, such as pyocin-S2 from Pseudomonas aeruginosa and colicin E7/E9 from E. coli. This domain has an alpha/beta fold containing a Zn2+ ion binding site [1-5]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth C], C [auth D], D [auth E] | IPR024575 | Cloacin/colicin | Family |
A [auth B], B [auth C], C [auth D], D [auth E] | IPR016128 | Pyosin/cloacin translocation domain | Domain |
A [auth B], B [auth C], C [auth D], D [auth E] | IPR044925 | His-Me finger superfamily | Homologous Superfamily |
A [auth B], B [auth C], C [auth D], D [auth E] | IPR024566 | Colicin, receptor domain | Domain |
A [auth B], B [auth C], C [auth D], D [auth E] | IPR036302 | Pyosin/cloacin translocation domain superfamily | Homologous Superfamily |
A [auth B], B [auth C], C [auth D], D [auth E] | IPR037146 | Colicin/pyocin, DNase domain superfamily | Homologous Superfamily |