1EHY

X-ray structure of the epoxide hydrolase from agrobacterium radiobacter ad1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Structure Motif: Primary M-CSA Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1ehya1	Alpha and beta proteins (a/b)	alpha/beta-Hydrolases	alpha/beta-Hydrolases	Epoxide hydrolase	Bacterial epoxide hydrolase	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
A	d1ehya2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
B	d1ehyb1	Alpha and beta proteins (a/b)	alpha/beta-Hydrolases	alpha/beta-Hydrolases	Epoxide hydrolase	Bacterial epoxide hydrolase	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
B	d1ehyb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
C	d1ehyc1	Alpha and beta proteins (a/b)	alpha/beta-Hydrolases	alpha/beta-Hydrolases	Epoxide hydrolase	Bacterial epoxide hydrolase	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
C	d1ehyc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
D	d1ehyd1	Alpha and beta proteins (a/b)	alpha/beta-Hydrolases	alpha/beta-Hydrolases	Epoxide hydrolase	Bacterial epoxide hydrolase	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)
D	d1ehyd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Agrobacterium tumefaciens ) [TaxId: 358 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Epoxide hydrolase	8020165	4000716	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	alpha/beta-Hydrolases	8032545	3000102	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	alpha/beta-Hydrolases	8032545	3000102	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	alpha/beta-Hydrolases	8032545	3000102	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	alpha/beta-Hydrolases	8032545	3000102	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Hydrolase_4_1	e1ehyA1	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Hydrolase_4_1	ECOD (1.6)
B	Hydrolase_4_1	e1ehyB1	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Hydrolase_4_1	ECOD (1.6)
C	Hydrolase_4_1	e1ehyC1	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Hydrolase_4_1	ECOD (1.6)
D	Hydrolase_4_1	e1ehyD1	A: a/b three-layered sandwiches	X: alpha/beta-Hydrolases (From Topology)	H: alpha/beta-Hydrolases (From Topology)	T: alpha/beta-Hydrolases	F: Hydrolase_4_1	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.50.1820	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Alpha/Beta hydrolase fold, catalytic domain	CATH (4.3.0)
B	3.40.50.1820	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Alpha/Beta hydrolase fold, catalytic domain	CATH (4.3.0)
C	3.40.50.1820	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Alpha/Beta hydrolase fold, catalytic domain	CATH (4.3.0)
D	3.40.50.1820	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Alpha/Beta hydrolase fold, catalytic domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00561	alpha/beta hydrolase fold (Abhydrolase_1)	alpha/beta hydrolase fold	This catalytic domain is found in a very wide range of enzymes.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	PROTEIN (SOLUBLE EPOXIDE HYDROLASE)	epoxide hydrolase activity ether hydrolase activity hydrolase activity, acting on ether bonds hydrolase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR000639	Epoxide hydrolase-like	Family
A, B, C, D	IPR000073	Alpha/beta hydrolase fold-1	Domain
A, B, C, D	IPR029058	Alpha/Beta hydrolase fold	Homologous Superfamily

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

Chains	Enzyme Name	Description	Catalytic Residues
A	epoxide hydrolase M-CSA #847	Epoxide hydrolases convert epoxides into more soluble and less toxic products, an essential process within cells. As a result, these enzymes have been found in a wide variety of organisms. Their ability to react enantioselectively with industrially important epoxides makes epoxide hydrolases promising bio-catalysts for the preparation of enantiomerically pure epoxides, and/or their corresponding vicinal diols.	Defined by 7 residues: TRP:A-38ASP:A-107PHE:A-108TYR:A-152TYR:A-215ASP:A-246HIS:A-275 \| Explore in 3D: M-CSA Motif Definition Search M-CSA Motif EC: 3.3.2.10 (PDB Primary Data) Search M-CSA Motif + EC 3.3.2.10

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.