1DP3
SOLUTION STRUCTURE OF THE DNA BINDING DOMAIN OF THE TRAM PROTEIN
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1dp3a_ | All alpha proteins | IHF-like DNA-binding proteins | IHF-like DNA-binding proteins | DNA-binding domain (fragment?) of the TraM protein | DNA-binding domain (fragment?) of the TraM protein | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.10.450 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | TraM protein, DNA-binding | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05261 | TraM protein, DNA-binding (Tra_M) | TraM protein, DNA-binding | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
TRAM PROTEIN | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR010992 | Integration host factor (IHF)-like DNA-binding domain superfamily | Homologous Superfamily | |
IPR042073 | TraM, DNA-binding domain | Homologous Superfamily | |
IPR007925 | Relaxosome protein TraM | Family |