1DOF
THE CRYSTAL STRUCTURE OF ADENYLOSUCCINATE LYASE FROM PYROBACULUM AEROPHILUM: INSIGHTS INTO THERMAL STABILITY AND HUMAN PATHOLOGY
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | d1dofc_ | All alpha proteins | L-aspartase-like | L-aspartase-like | L-aspartase/fumarase | Adenylosuccinate lyase | (Pyrobaculum aerophilum ) [TaxId: 13773 ], | SCOPe (2.08) |
D | d1dofd_ | All alpha proteins | L-aspartase-like | L-aspartase-like | L-aspartase/fumarase | Adenylosuccinate lyase | (Pyrobaculum aerophilum ) [TaxId: 13773 ], | SCOPe (2.08) |
A | d1dofa_ | All alpha proteins | L-aspartase-like | L-aspartase-like | L-aspartase/fumarase | Adenylosuccinate lyase | (Pyrobaculum aerophilum ) [TaxId: 13773 ], | SCOPe (2.08) |
B | d1dofb_ | All alpha proteins | L-aspartase-like | L-aspartase-like | L-aspartase/fumarase | Adenylosuccinate lyase | (Pyrobaculum aerophilum ) [TaxId: 13773 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C | SCOP2B Superfamily | L-aspartase-like | 8038844 | 3001572 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | L-aspartase-like | 8038844 | 3001572 | SCOP2B (2022-06-29) |
A | SCOP2 Family | L-aspartase/fumarase | 8026465 | 4001433 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | L-aspartase-like | 8038844 | 3001572 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | L-aspartase-like | 8038844 | 3001572 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | Adenylsuccinate_lyase_1_1 | e1dofC3 | A: alpha arrays | X: L-aspartase N-terminal domain-like (From Topology) | H: L-aspartase N-terminal domain-like (From Topology) | T: L-aspartase N-terminal domain-like | F: Adenylsuccinate_lyase_1_1 | ECOD (1.6) |
C | Adenylsuccinate_lyase_1_like | e1dofC2 | A: alpha arrays | X: L-aspartase C-terminal domain-like (From Homology) | H: L-aspartase C-terminal domain-like | T: L-aspartase C-terminal domain-like | F: Adenylsuccinate_lyase_1_like | ECOD (1.6) |
C | Lyase_1_C | e1dofC1 | A: alpha arrays | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like (From Topology) | T: L-aspartase middle domain-like | F: Lyase_1_C | ECOD (1.6) |
D | Adenylsuccinate_lyase_1_1 | e1dofD3 | A: alpha arrays | X: L-aspartase N-terminal domain-like (From Topology) | H: L-aspartase N-terminal domain-like (From Topology) | T: L-aspartase N-terminal domain-like | F: Adenylsuccinate_lyase_1_1 | ECOD (1.6) |
D | Adenylsuccinate_lyase_1_like | e1dofD2 | A: alpha arrays | X: L-aspartase C-terminal domain-like (From Homology) | H: L-aspartase C-terminal domain-like | T: L-aspartase C-terminal domain-like | F: Adenylsuccinate_lyase_1_like | ECOD (1.6) |
D | Lyase_1_C | e1dofD1 | A: alpha arrays | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like (From Topology) | T: L-aspartase middle domain-like | F: Lyase_1_C | ECOD (1.6) |
A | Adenylsuccinate_lyase_1_1 | e1dofA3 | A: alpha arrays | X: L-aspartase N-terminal domain-like (From Topology) | H: L-aspartase N-terminal domain-like (From Topology) | T: L-aspartase N-terminal domain-like | F: Adenylsuccinate_lyase_1_1 | ECOD (1.6) |
A | Adenylsuccinate_lyase_1_like | e1dofA2 | A: alpha arrays | X: L-aspartase C-terminal domain-like (From Homology) | H: L-aspartase C-terminal domain-like | T: L-aspartase C-terminal domain-like | F: Adenylsuccinate_lyase_1_like | ECOD (1.6) |
A | Lyase_1_C | e1dofA1 | A: alpha arrays | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like (From Topology) | T: L-aspartase middle domain-like | F: Lyase_1_C | ECOD (1.6) |
B | Adenylsuccinate_lyase_1_1 | e1dofB3 | A: alpha arrays | X: L-aspartase N-terminal domain-like (From Topology) | H: L-aspartase N-terminal domain-like (From Topology) | T: L-aspartase N-terminal domain-like | F: Adenylsuccinate_lyase_1_1 | ECOD (1.6) |
B | Adenylsuccinate_lyase_1_like | e1dofB2 | A: alpha arrays | X: L-aspartase C-terminal domain-like (From Homology) | H: L-aspartase C-terminal domain-like | T: L-aspartase C-terminal domain-like | F: Adenylsuccinate_lyase_1_like | ECOD (1.6) |
B | Lyase_1_C | e1dofB1 | A: alpha arrays | X: L-aspartase middle domain-like | H: L-aspartase middle domain-like (From Topology) | T: L-aspartase middle domain-like | F: Lyase_1_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00206 | Lyase (Lyase_1) | Lyase | - | Domain | |
PF22304 | Adenylosuccinate Lyase, C-terminal domain (ASLyase_C) | Adenylosuccinate Lyase, C-terminal domain | This entry represents a C-terminal helical domain present in the adenylosuccinate lyase from Pyrobaculum aerophilum [1]. This domain is remotely related to Pfam:PF10397 (Adenylosuccinate lyase C-terminus). | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000362 | Fumarate lyase family | Family | |
IPR022761 | Fumarate lyase, N-terminal | Domain | |
IPR004769 | Adenylosuccinate lyase | Family | |
IPR024083 | Fumarase/histidase, N-terminal | Homologous Superfamily | |
IPR008948 | L-Aspartase-like | Homologous Superfamily | |
IPR020557 | Fumarate lyase, conserved site | Conserved Site |