Exploring the genome of Chitinophaga (CB10) for metalocarboxipeptidase activity
Fernandes, G., Machado, E., Pereira, M., Brear, P., Lemos, E.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
M32 carboxypeptidase | 500 | Chitinophagaceae bacterium | Mutation(s): 0  | ||
UniProt | |||||
Find proteins for A0A822ZZF9 (Chitinophaga sp. CB10) Explore A0A822ZZF9  Go to UniProtKB:  A0A822ZZF9 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A822ZZF9 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
CIT Query on CIT | G [auth A], K [auth B] | CITRIC ACID C6 H8 O7 KRKNYBCHXYNGOX-UHFFFAOYSA-N | |||
PEG Query on PEG | F [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
GOL Query on GOL | C [auth A] D [auth A] E [auth A] H [auth B] I [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 93.095 | α = 90 |
b = 110.266 | β = 90 |
c = 113.871 | γ = 90 |
Software Name | Purpose |
---|---|
XDS | data reduction |
Aimless | data scaling |
PHASER | phasing |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
Funding Organization | Location | Grant Number |
---|---|---|
Coordination for the Improvement of Higher Education Personnel | Brazil | 001 |