6ZPJ

Crystal structure of the unconventional kinetochore protein Leishmania mexicana KKT4 coiled coil domain


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.199 
  • R-Value Observed: 0.200 

wwPDB Validation 3D Report Full Report



Literature

Structural characterisation of KKT4, an unconventional microtubule-binding kinetochore protein

Ludzia, P.Lowe, E.Marciano, G.Mohammed, S.Redfield, C.Akiyoshi, B.

(2020) Biorxiv 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Leishmania mexicana KKT4AB126Leishmania mexicana MHOM/GT/2001/U1103Mutation(s): 1 
Gene Names: LMXM_10_0300
Find proteins for E9AN40 (Leishmania mexicana (strain MHOM/GT/2001/U1103))
Explore E9AN40 
Go to UniProtKB:  E9AN40
Protein Feature View
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  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MPD
Query on MPD

Download CCD File 
A, B
(4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
 Ligand Interaction
IMD
Query on IMD

Download CCD File 
A
IMIDAZOLE
C3 H5 N2
RAXXELZNTBOGNW-UHFFFAOYSA-O
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.90 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.199 
  • R-Value Observed: 0.200 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 31.31α = 90
b = 37.71β = 92.17
c = 122.39γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
Arcimboldophasing
BUCCANEERmodel building
Aimlessdata scaling
DIALSdata reduction

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Wellcome TrustUnited Kingdom210622/Z/18/Z

Revision History 

  • Version 1.0: 2020-10-21
    Type: Initial release