6W6P

MultiBody Refinement of 70S Ribosome from Enterococcus faecalis

  • Classification: RIBOSOME
  • Organism(s): Enterococcus faecalis OG1RF
  • Mutation(s): No 

  • Deposited: 2020-03-17 Released: 2020-10-14 
  • Deposition Author(s): Jogl, G., Khayat, R.
  • Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)

Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation 3D Report Full Report



Literature

Cryo-electron microscopy structure of the 70S ribosome from Enterococcus faecalis.

Murphy, E.L.Singh, K.V.Avila, B.Kleffmann, T.Gregory, S.T.Murray, B.E.Krause, K.L.Khayat, R.Jogl, G.

(2020) Sci Rep 10: 16301-16301

  • DOI: 10.1038/s41598-020-73199-6
  • Primary Citation of Related Structures:  
    6O8X, 6O8W, 6O8Z, 6O8Y, 6O90, 6W6P

  • PubMed Abstract: 
  • Enterococcus faecalis is a gram-positive organism responsible for serious infections in humans, but as with many bacterial pathogens, resistance has rendered a number of commonly used antibiotics ineffective. Here, we report the cryo-EM structure of ...

    Enterococcus faecalis is a gram-positive organism responsible for serious infections in humans, but as with many bacterial pathogens, resistance has rendered a number of commonly used antibiotics ineffective. Here, we report the cryo-EM structure of the E. faecalis 70S ribosome to a global resolution of 2.8 Å. Structural differences are clustered in peripheral and solvent exposed regions when compared with Escherichia coli, whereas functional centres, including antibiotic binding sites, are similar to other bacterial ribosomes. Comparison of intersubunit conformations among five classes obtained after three-dimensional classification identifies several rotated states. Large ribosomal subunit protein bL31, which forms intersubunit bridges to the small ribosomal subunit, assumes different conformations in the five classes, revealing how contacts to the small subunit are maintained throughout intersubunit rotation. A tRNA observed in one of the five classes is positioned in a chimeric pe/E position in a rotated ribosomal state. The 70S ribosome structure of E. faecalis now extends our knowledge of bacterial ribosome structures and may serve as a basis for the development of novel antibiotic compounds effective against this pathogen.


    Organizational Affiliation

    Department of Molecular Biology, Cell Biology, and Biochemistry, Brown University, Providence, RI, 02912, USA. gerwald_jogl@brown.edu.



Macromolecules

Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S3c204Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKR8 (Enterococcus faecalis)
Explore A0A1B4XKR8 
Go to UniProtKB:  A0A1B4XKR8
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S4d201Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XRV7 (Enterococcus faecalis)
Explore A0A1B4XRV7 
Go to UniProtKB:  A0A1B4XRV7
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S5e163Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKW0 (Enterococcus faecalis)
Explore A0A1B4XKW0 
Go to UniProtKB:  A0A1B4XKW0
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 5
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S6f97Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKB6 (Enterococcus faecalis)
Explore A0A1B4XKB6 
Go to UniProtKB:  A0A1B4XKB6
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 6
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S7g154Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKQ3 (Enterococcus faecalis)
Explore A0A1B4XKQ3 
Go to UniProtKB:  A0A1B4XKQ3
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 7
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S8h131Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKS6 (Enterococcus faecalis)
Explore A0A1B4XKS6 
Go to UniProtKB:  A0A1B4XKS6
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 8
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S9i128Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XSA2 (Enterococcus faecalis)
Explore A0A1B4XSA2 
Go to UniProtKB:  A0A1B4XSA2
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 9
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S10j99Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKR5 (Enterococcus faecalis)
Explore A0A1B4XKR5 
Go to UniProtKB:  A0A1B4XKR5
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 10
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S11k117Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKV1 (Enterococcus faecalis)
Explore A0A1B4XKV1 
Go to UniProtKB:  A0A1B4XKV1
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 11
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S12l136Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKQ7 (Enterococcus faecalis)
Explore A0A1B4XKQ7 
Go to UniProtKB:  A0A1B4XKQ7
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 12
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S13m112Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKT7 (Enterococcus faecalis)
Explore A0A1B4XKT7 
Go to UniProtKB:  A0A1B4XKT7
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 13
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S14 type Zn60Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKT0 (Enterococcus faecalis)
Explore A0A1B4XKT0 
Go to UniProtKB:  A0A1B4XKT0
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 14
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S15o88Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XRW3 (Enterococcus faecalis)
Explore A0A1B4XRW3 
Go to UniProtKB:  A0A1B4XRW3
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 15
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S16p89Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XP69 (Enterococcus faecalis)
Explore A0A1B4XP69 
Go to UniProtKB:  A0A1B4XP69
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 16
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S17q83Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKS3 (Enterococcus faecalis)
Explore A0A1B4XKS3 
Go to UniProtKB:  A0A1B4XKS3
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 17
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S18r66Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKB3 (Enterococcus faecalis)
Explore A0A1B4XKB3 
Go to UniProtKB:  A0A1B4XKB3
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 18
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S19s78Enterococcus faecalis OG1RFMutation(s): 0 
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 19
MoleculeChainsSequence LengthOrganismDetailsImage
30S ribosomal protein S20t82Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XQJ7 (Enterococcus faecalis)
Explore A0A1B4XQJ7 
Go to UniProtKB:  A0A1B4XQJ7
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 22
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L2C275Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKR6 (Enterococcus faecalis)
Explore A0A1B4XKR6 
Go to UniProtKB:  A0A1B4XKR6
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 23
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L3D207Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKR3 (Enterococcus faecalis)
Explore A0A1B4XKR3 
Go to UniProtKB:  A0A1B4XKR3
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 24
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L4E206Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKU7 (Enterococcus faecalis)
Explore A0A1B4XKU7 
Go to UniProtKB:  A0A1B4XKU7
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 25
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L5F177Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKS2 (Enterococcus faecalis)
Explore A0A1B4XKS2 
Go to UniProtKB:  A0A1B4XKS2
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 26
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L6G176Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKU3 (Enterococcus faecalis)
Explore A0A1B4XKU3 
Go to UniProtKB:  A0A1B4XKU3
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 27
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L13K145Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XSB2 (Enterococcus faecalis)
Explore A0A1B4XSB2 
Go to UniProtKB:  A0A1B4XSB2
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 28
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L14L122Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKS1 (Enterococcus faecalis)
Explore A0A1B4XKS1 
Go to UniProtKB:  A0A1B4XKS1
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 29
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L15M146Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKT1 (Enterococcus faecalis)
Explore A0A1B4XKT1 
Go to UniProtKB:  A0A1B4XKT1
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 30
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L16N141Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKU1 (Enterococcus faecalis)
Explore A0A1B4XKU1 
Go to UniProtKB:  A0A1B4XKU1
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 31
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L17O124Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKX1 (Enterococcus faecalis)
Explore A0A1B4XKX1 
Go to UniProtKB:  A0A1B4XKX1
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 32
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L18P117Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKS7 (Enterococcus faecalis)
Explore A0A1B4XKS7 
Go to UniProtKB:  A0A1B4XKS7
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 33
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L19Q114Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XPL8 (Enterococcus faecalis)
Explore A0A1B4XPL8 
Go to UniProtKB:  A0A1B4XPL8
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 34
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L20R118Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XM76 (Enterococcus faecalis)
Explore A0A1B4XM76 
Go to UniProtKB:  A0A1B4XM76
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 35
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L21S102Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XMC1 (Enterococcus faecalis)
Explore A0A1B4XMC1 
Go to UniProtKB:  A0A1B4XMC1
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 36
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L22T112Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKT6 (Enterococcus faecalis)
Explore A0A1B4XKT6 
Go to UniProtKB:  A0A1B4XKT6
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 37
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L23U89Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKR7 (Enterococcus faecalis)
Explore A0A1B4XKR7 
Go to UniProtKB:  A0A1B4XKR7
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 38
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L24V101Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKV5 (Enterococcus faecalis)
Explore A0A1B4XKV5 
Go to UniProtKB:  A0A1B4XKV5
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 39
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L27X76Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XMB1 (Enterococcus faecalis)
Explore A0A1B4XMB1 
Go to UniProtKB:  A0A1B4XMB1
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 40
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L28Y54Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XRZ8 (Enterococcus faecalis)
Explore A0A1B4XRZ8 
Go to UniProtKB:  A0A1B4XRZ8
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 41
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L29Z61Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKV0 (Enterococcus faecalis)
Explore A0A1B4XKV0 
Go to UniProtKB:  A0A1B4XKV0
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 42
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L30058Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKW1 (Enterococcus faecalis)
Explore A0A1B4XKW1 
Go to UniProtKB:  A0A1B4XKW1
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 43
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L32256Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XMM2 (Enterococcus faecalis)
Explore A0A1B4XMM2 
Go to UniProtKB:  A0A1B4XMM2
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 44
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L33349Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XR98 (Enterococcus faecalis)
Explore A0A1B4XR98 
Go to UniProtKB:  A0A1B4XR98
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 45
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L34444Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XSI4 (Enterococcus faecalis)
Explore A0A1B4XSI4 
Go to UniProtKB:  A0A1B4XSI4
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 46
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L35564Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XM73 (Enterococcus faecalis)
Explore A0A1B4XM73 
Go to UniProtKB:  A0A1B4XM73
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 47
MoleculeChainsSequence LengthOrganismDetailsImage
50S ribosomal protein L36638Enterococcus faecalis OG1RFMutation(s): 0 
Find proteins for A0A1B4XKT9 (Enterococcus faecalis)
Explore A0A1B4XKT9 
Go to UniProtKB:  A0A1B4XKT9
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Find similar nucleic acids by: 
(by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsLengthOrganismImage
16S rRNAa1548Enterococcus faecalis OG1RF
Find similar nucleic acids by: 
(by identity cutoff)  |  Structure
Entity ID: 20
MoleculeChainsLengthOrganismImage
23S rRNAA2908Enterococcus faecalis OG1RF
Find similar nucleic acids by: 
(by identity cutoff)  |  Structure
Entity ID: 21
MoleculeChainsLengthOrganismImage
5S rRNAB116Enterococcus faecalis OG1RF
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download CCD File 
2, 3, 6, n
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data

  • Deposited Date: 2020-03-17 
  • Released Date: 2020-10-14 
  • Deposition Author(s): Jogl, G., Khayat, R.

Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM094157
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesG12MD007603

Revision History 

  • Version 1.0: 2020-10-14
    Type: Initial release