6KI6

Crystal structure of BCL11A in complex with gamma-globin -115 HPFH region


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.207 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structural insights into the recognition of gamma-globin gene promoter by BCL11A.

Yang, Y.Xu, Z.He, C.Zhang, B.Shi, Y.Li, F.

(2019) Cell Res. --: --


Macromolecules

Find similar proteins by: Sequence  |  Structure


Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
B-cell lymphoma/leukemia 11A
A, B
109Homo sapiensMutation(s): 0 
Gene Names: BCL11A (CTIP1, EVI9, KIAA1809, ZNF856)
Find proteins for Q9H165 (Homo sapiens)
Go to Gene View: BCL11A
Go to UniProtKB:  Q9H165
Entity ID: 2
MoleculeChainsLengthOrganism
DNA (5'-D(*AP*TP*AP*TP*TP*GP*GP*TP*CP*AP*AP*GP*G)-3')C,F13Homo sapiens
Entity ID: 3
MoleculeChainsLengthOrganism
DNA (5'-D(*TP*CP*CP*TP*TP*GP*AP*CP*CP*AP*AP*TP*A)-3')D,E13Homo sapiens
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ZN
Query on ZN

Download SDF File 
Download CCD File 
A, B
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.207 
  • Space Group: P 32 2 1
Unit Cell:
Length (Å)Angle (°)
a = 59.555α = 90.00
b = 59.555β = 90.00
c = 213.367γ = 120.00
Software Package:
Software NamePurpose
PHENIXrefinement
PDB_EXTRACTdata extraction
HKL-2000data reduction
SCALEPACKdata scaling
PHENIXphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2019-09-11
    Type: Initial release