6C53

Cryo-EM structure of the Type 1 pilus rod


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.20 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Functional role of the type 1 pilus rod structure in mediating host-pathogen interactions.

Spaulding, C.N.Schreiber, H.L.Zheng, W.Dodson, K.W.Hazen, J.E.Conover, M.S.Wang, F.Svenmarker, P.Luna-Rico, A.Francetic, O.Andersson, M.Hultgren, S.Egelman, E.H.

(2018) Elife 7

  • DOI: https://doi.org/10.7554/eLife.31662
  • Primary Citation of Related Structures:  
    6C53

  • PubMed Abstract: 

    Uropathogenic E. coli (UPEC), which cause urinary tract infections (UTI), utilize type 1 pili, a chaperone usher pathway (CUP) pilus, to cause UTI and colonize the gut. The pilus rod, comprised of repeating FimA subunits, provides a structural scaffold for displaying the tip adhesin, FimH. We solved the 4.2 Å resolution structure of the type 1 pilus rod using cryo-electron microscopy. Residues forming the interactive surfaces that determine the mechanical properties of the rod were maintained by selection based on a global alignment of fimA sequences. We identified mutations that did not alter pilus production in vitro but reduced the force required to unwind the rod. UPEC expressing these mutant pili were significantly attenuated in bladder infection and intestinal colonization in mice. This study elucidates an unappreciated functional role for the molecular spring-like property of type 1 pilus rods in host-pathogen interactions and carries important implications for other pilus-mediated diseases.


  • Organizational Affiliation

    Center for Women's Infectious Disease Research, Washington University School of Medicine, St. Louis, United States.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Type-1 fimbrial protein, A chain
A, B, C, D, E
A, B, C, D, E, F, G, H, I, J, K
159Escherichia coli K-12Mutation(s): 0 
UniProt
Find proteins for P04128 (Escherichia coli (strain K12))
Explore P04128 
Go to UniProtKB:  P04128
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP04128
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.20 Å
  • Aggregation State: FILAMENT 
  • Reconstruction Method: HELICAL 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTPHENIX
MODEL REFINEMENTCoot
RECONSTRUCTIONSPIDER

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM122510

Revision History  (Full details and data files)

  • Version 1.0: 2018-01-31
    Type: Initial release
  • Version 1.1: 2019-12-18
    Changes: Author supporting evidence, Other