6AWU

Structure of PR 10 Allergen Ara h 8.01 in complex with caffeic acid


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.05 Å
  • R-Value Free: 0.259 
  • R-Value Work: 0.209 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure of PR-10 Allergen Ara h 8.01.

Offermann, L.R.Yarbrough, J.McBride, J.Hurlburt, B.K.Maleki, S.J.Pote, S.S.Chruszcz, M.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Ara h 8 allergen
A, B, C, D
156Arachis hypogaeaMutation(s): 0 
Find proteins for Q6VT83 (Arachis hypogaea)
Go to UniProtKB:  Q6VT83
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

Download SDF File 
Download CCD File 
B, C
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
CL
Query on CL

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Download CCD File 
B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
DHC
Query on DHC

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Download CCD File 
A, B, C, D
CAFFEIC ACID
3,4-DIHYDROXYCINNAMIC ACID
C9 H8 O4
QAIPRVGONGVQAS-DUXPYHPUSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.05 Å
  • R-Value Free: 0.259 
  • R-Value Work: 0.209 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 54.919α = 90.00
b = 60.798β = 90.00
c = 186.268γ = 90.00
Software Package:
Software NamePurpose
MOLREPphasing
REFMACrefinement
HKL-2000data scaling
HKL-3000refinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2018-09-12
    Type: Initial release