Crystal structure of alpha-L-arabinofuranosidase from Lactobacillus brevis
Linares-Pasten, J.A., Falck, P., Albasri, K., Kjellstrom, S., Adlercreutz, P., Logan, D.T., Nordberg Karlsson, E.To be published.
Experimental Data Snapshot
Starting Model: other
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Beta-xylosidase | 346 | Levilactobacillus brevis | Mutation(s): 0  Gene Names: UCCLBBS449_1869 | ||
UniProt | |||||
Find proteins for A0A5B7Y0Z3 (Levilactobacillus brevis) Explore A0A5B7Y0Z3  Go to UniProtKB:  A0A5B7Y0Z3 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A5B7Y0Z3 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 5 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
1PE Query on 1PE | G [auth A] | PENTAETHYLENE GLYCOL C10 H22 O6 JLFNLZLINWHATN-UHFFFAOYSA-N | |||
PG4 Query on PG4 | J [auth B] | TETRAETHYLENE GLYCOL C8 H18 O5 UWHCKJMYHZGTIT-UHFFFAOYSA-N | |||
PGE Query on PGE | E [auth A], F [auth A] | TRIETHYLENE GLYCOL C6 H14 O4 ZIBGPFATKBEMQZ-UHFFFAOYSA-N | |||
TRS Query on TRS | D [auth A], I [auth B], K [auth B], L [auth B] | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O | |||
MG Query on MG | C [auth A], H [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 132.148 | α = 90 |
b = 132.148 | β = 90 |
c = 266.925 | γ = 120 |
Software Name | Purpose |
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BUSTER | refinement |
XDS | data reduction |
SCALA | data scaling |
PHASER | phasing |