5F1P

Crystal Structure of Dehydrogenase from Streptomyces platensis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.190 
  • R-Value Observed: 0.192 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal Structure of a Dehydrogenase, PtmO8, from Streptomyces platensis

Kim, Y.Li, H.Endres, M.Babnigg, G.Rudolf, J.Ma, M.Chang, C.-Y.Shen, B.Phillips Jr., G.N.Joachimiak, A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
PtmO8 AB265Streptomyces platensis subsp. rosaceusMutation(s): 3 
Find proteins for A0A0A0UVL0 (Streptomyces platensis)
Explore A0A0A0UVL0 
Go to UniProtKB:  A0A0A0UVL0
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A,BL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.242 
  • R-Value Work: 0.190 
  • R-Value Observed: 0.192 
  • Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 77.368α = 90
b = 77.953β = 105.47
c = 81.575γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
HKL-3000data reduction
HKL-3000data scaling
HKL-3000phasing
MLPHAREphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United States--

Revision History 

  • Version 1.0: 2015-12-30
    Type: Initial release
  • Version 1.1: 2017-02-22
    Changes: Database references, Structure summary
  • Version 1.2: 2019-12-04
    Changes: Author supporting evidence