4ZTA

Ebola virus nucleoprotein bound to VP35 chaperoning peptide I212121

  • Classification: VIRAL PROTEIN
  • Organism(s): Ebola virus - Mayinga, Zaire, 1976
  • Expression System: Escherichia coli
  • Mutation(s): No 

  • Deposited: 2015-05-14 Released: 2015-05-27 
  • Deposition Author(s): Kirchdoerfer, R.N., Abelson, D.M., Saphire, E.O.
  • Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID), Burroughs Wellcome Fund, Skaggs Institute for Chemical Biology, National Institutes of Health/National Cancer Institute (NIH/NCI), National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), Department of Energy (DOE, United States)

Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.203 
  • R-Value Observed: 0.205 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Ebola virus nucleoprotein bound to VP35 chaperoning peptide I212121

Kirchdoerfer, R.N.Abelson, D.M.Li, S.Wood, M.R.Saphire, E.O.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Polymerase cofactor VP35,NucleoproteinA381Ebola virus - Mayinga, Zaire, 1976Mutation(s): 0 
Gene Names: VP35
Find proteins for Q05127 (Zaire ebolavirus (strain Mayinga-76))
Explore Q05127 
Go to UniProtKB:  Q05127
Find proteins for P18272 (Zaire ebolavirus (strain Mayinga-76))
Explore P18272 
Go to UniProtKB:  P18272
Protein Feature View
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.233 
  • R-Value Work: 0.203 
  • R-Value Observed: 0.205 
  • Space Group: I 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 91.21α = 90
b = 93.14β = 90
c = 114.94γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
XSCALEdata scaling
PHENIXphasing
PDB_EXTRACTdata extraction
XDSdata reduction

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United States1R56 AI118016-01
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United States5T32 AI007354-25
Burroughs Wellcome FundUnited States--
Skaggs Institute for Chemical BiologyUnited States--
National Institutes of Health/National Cancer Institute (NIH/NCI)United StatesACB-12002
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesAGM-12006
Department of Energy (DOE, United States)United StatesDE-AC02-06CH11357

Revision History 

  • Version 1.0: 2015-05-27
    Type: Initial release
  • Version 1.1: 2017-09-27
    Changes: Author supporting evidence, Database references, Derived calculations, Source and taxonomy
  • Version 1.2: 2017-10-11
    Changes: Data collection
  • Version 1.3: 2019-12-04
    Changes: Author supporting evidence