Macromolecule Content

Total Structure Weight: 54.86 kDa
Atom Count: 4334
Modelled Residue Count: 518
Deposited Residue Count: 526
Unique protein chains: 1

4O5O

X-ray Crystal Structure of a 3-hydroxyacyl-CoA dehydrogenase from Brucella suis

DOI: 10.2210/pdb4O5O/pdb

Classification: OXIDOREDUCTASE
Organism(s): Brucella suis 1330
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2013-12-19 Released: 2014-01-01
Deposition Author(s): Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.40 Å
R-Value Free: 0.169
R-Value Work: 0.136
R-Value Observed: 0.137

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

X-ray Crystal Structure of a 3-hydroxyacyl-CoA dehydrogenase from Brucella suis

Fairman, J.W., Abendroth, J., Edwards, T.E., Lorimer, D.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
3-hydroxyacyl-CoA dehydrogenase	A, B	263	Brucella suis 1330	Mutation(s): 0 Gene Names: BRA0449, BS1330_II0446
Find proteins for A0A0H3G6B0 (Brucella suis biovar 1 (strain 1330)) Explore A0A0H3G6B0 Go to UniProtKB: A0A0H3G6B0
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
TRS Query on TRS Download Ideal Coordinates CCD File SDF format, chain F [B] MOL2 format, chain F [B]	B	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C₄ H₁₂ N O₃ LENZDBCJOHFCAS-UHFFFAOYSA-O		Ligand Interaction
ZN Query on ZN Download Ideal Coordinates CCD File SDF format, chain C [A] MOL2 format, chain C [A]	A	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Ligand Interaction
EDO Query on EDO Download Ideal Coordinates CCD File SDF format, chain D [B] SDF format, chain E [B] MOL2 format, chain D [B] MOL2 format, chain E [B]	B	1,2-ETHANEDIOL C₂ H₆ O₂ LYCAIKOWRPUZTN-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.40 Å
R-Value Free: 0.169
R-Value Work: 0.136
R-Value Observed: 0.137
Space Group: C 2 2 2₁
Diffraction Data DOI: 10.18430/M34O5O Protein Diffraction

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 76.47	α = 90
b = 92.24	β = 90
c = 135.49	γ = 90

Software Package:

Software Name	Purpose
XSCALE	data scaling
PHASER	phasing
REFMAC	refinement
PDB_EXTRACT	data extraction
XDS	data reduction

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2013-12-19
Released Date: 2014-01-01

Deposition Author(s):

Seattle Structural Genomics Center for Infectious Disease (SSGCID)

Revision History (Full details and data files)

Version 1.0: 2014-01-01
Type: Initial release

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.