4JDS

SETD7 in complex with inhibitor PF-5426 and S-adenosyl-methionine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.223 
  • R-Value Work: 0.199 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

SETD7 in complex with inhibitor PF-5426 and S-adenosyl-methionine

Dong, A.Wu, H.Zeng, H.El Bakkouri, M.Barsyte, D.Vedadi, M.Tatlock, J.Owen, D.Bunnage, M.Bountra, C.Arrowsmith, C.H.Edwards, A.M.Brown, P.J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Histone-lysine N-methyltransferase SETD7
A, B, C, D
264Homo sapiensMutation(s): 0 
Gene Names: SETD7 (KIAA1717, KMT7, SET7, SET9)
EC: 2.1.1.43
Find proteins for Q8WTS6 (Homo sapiens)
Go to Gene View: SETD7
Go to UniProtKB:  Q8WTS6
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
UNX
Query on UNX

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Download CCD File 
A, B, C, D
UNKNOWN ATOM OR ION
X
*
 Ligand Interaction
SAM
Query on SAM

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Download CCD File 
A, B, C, D
S-ADENOSYLMETHIONINE
C15 H22 N6 O5 S
MEFKEPWMEQBLKI-FCKMPRQPSA-N
 Ligand Interaction
1L4
Query on 1L4

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Download CCD File 
A, B, C, D
N-[(2R)-3-(3-cyanophenyl)-1-oxo-1-(pyrrolidin-1-yl)propan-2-yl]-8-fluoro-1,2,3,4-tetrahydroisoquinoline-6-sulfonamide
C23 H25 F N4 O3 S
HMBXWXQQVHJMOO-JOCHJYFZSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.223 
  • R-Value Work: 0.199 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 118.048α = 90.00
b = 134.482β = 90.00
c = 137.255γ = 90.00
Software Package:
Software NamePurpose
Cootmodel building
MOLREPphasing
PDB_EXTRACTdata extraction
SCALEPACKdata scaling
REFMACrefinement
HKL-3000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2013-03-27
    Type: Initial release