A Different Fold with an Integrin-Binding Loop Specialized for Flexibility in Mucosal Addressin Cell Adhesion Molecule-1
Springer, T., Yu, Y., Zhu, J., Wang, J.-H., Huang, P.-S.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Mucosal addressin cell adhesion molecule 1 | 206 | Homo sapiens | Mutation(s): 2  Gene Names: MADCAM1 | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q13477 (Homo sapiens) Explore Q13477  Go to UniProtKB:  Q13477 | |||||
PHAROS:  Q13477 GTEx:  ENSG00000099866  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q13477 | ||||
Glycosylation | |||||
Glycosylation Sites: 1 | Go to GlyGen: Q13477-1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | F [auth B] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N | |||
SO4 Query on SO4 | C [auth A], E [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L | |||
GOL Query on GOL | D [auth A] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 58.32 | α = 90 |
b = 69.7 | β = 90 |
c = 101.2 | γ = 90 |
Software Name | Purpose |
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HKL-2000 | data collection |
PHASER | phasing |
PHENIX | refinement |
XDS | data reduction |
SCALA | data scaling |