4BMV

Short-chain dehydrogenase from Sphingobium yanoikuyae in complex with NADPH


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.234 
  • R-Value Observed: 0.235 

wwPDB Validation   3D Report Full Report



Literature

Structures of Alcohol Dehydrogenases from Ralstonia and Sphingobium Spp. Reveal the Molecular Basis for Their Recognition of 'Bulky-Bulky' Ketones

Man, H.Kedziora, K.Kulig, J.Frank, A.Lavandera, I.Gotor-Fernandez, V.Rother, D.Hart, S.Turkenburg, J.P.Grogan, G.

(2014) Top Catal 57: 356


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
SHORT-CHAIN DEHYDROGENASEABCDEFGHABCDEFGHIJ
262Sphingobium yanoikuyaeMutation(s): 0 
EC: 1.1.1.1
Find proteins for B9U359 (Sphingobium yanoikuyae)
Explore B9U359 
Go to UniProtKB:  B9U359
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.50 Å
  • R-Value Free: 0.251 
  • R-Value Work: 0.234 
  • R-Value Observed: 0.235 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 144.91α = 90
b = 86.84β = 106.36
c = 155.61γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
SCALAdata scaling
BALBESphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2014-03-19
    Type: Initial release