2VI4

Atomic resolution (1.10 A) structure of purified thaumatin I grown in sodium DL-tartrate at 6 C.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Free: 0.140 
  • R-Value Work: 0.125 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Tartrate Chirality Determines Thaumatin Crystal Habit

Asherie, N.Jakoncic, J.Ginsberg, C.Greenbaum, A.Stojanoff, V.Hrnjez, B.J.Blass, S.Berger, J.

(2009) Cryst.Growth Des. 9: 4189


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
THAUMATIN-1
A
207Thaumatococcus daniellii
Find proteins for P02883 (Thaumatococcus daniellii)
Go to UniProtKB:  P02883
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GOL
Query on GOL

Download SDF File 
Download CCD File 
A
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
TLA
Query on TLA

Download SDF File 
Download CCD File 
A
L(+)-TARTARIC ACID
C4 H6 O6
FEWJPZIEWOKRBE-JCYAYHJZSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.1 Å
  • R-Value Free: 0.140 
  • R-Value Work: 0.125 
  • Space Group: P 41 21 2
Unit Cell:
Length (Å)Angle (°)
a = 57.921α = 90.00
b = 57.921β = 90.00
c = 149.946γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
SCALEPACKdata scaling
DENZOdata reduction
MOLREPphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-02-10
    Type: Initial release
  • Version 1.1: 2014-12-31
    Type: Data collection, Derived calculations, Non-polymer description, Other, Version format compliance