Macromolecule Content

Total Structure Weight: 60.94 kDa
Atom Count: 5481
Modelled Residue Count: 556
Deposited Residue Count: 559
Unique protein chains: 1

2VFP

Low Temperature Structure of P22 Tailspike Protein Fragment (109-666), Mutant V349L

DOI: 10.2210/pdb2VFP/pdb

Classification: HYDROLASE
Organism(s): Salmonella virus P22
Expression System: Escherichia coli
Mutation(s): Yes

Deposited: 2007-11-05 Released: 2008-12-16
Deposition Author(s): Becker, M., Mueller, J.J., Heinemann, U., Seckler, R.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.55 Å
R-Value Free: 0.152
R-Value Work: 0.123
R-Value Observed: 0.125

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Side-Chain Stacking and Beta-Helix Stability in P22 Tailspike Protein

Becker, M., Mueller, J.J., Weikl, T., Heinemann, U., Seckler, R.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
P22 TAILSPIKE PROTEIN	A	559	Salmonella virus P22	Mutation(s): 1 Gene Names: 9 EC: 3.2.1
Find proteins for P12528 (Salmonella phage P22) Explore P12528 Go to UniProtKB: P12528
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
SO4 Query on SO4 Download Ideal Coordinates CCD File SDF format, chain H [A] MOL2 format, chain H [A]	A	SULFATE ION O₄ S QAOWNCQODCNURD-UHFFFAOYSA-L		Ligand Interaction
GOL Query on GOL Download Ideal Coordinates CCD File SDF format, chain B [A] SDF format, chain C [A] SDF format, chain D [A] SDF format, chain E [A] SDF format, chain F [A] SDF format, chain G [A] MOL2 format, chain B [A] MOL2 format, chain C [A] MOL2 format, chain D [A] MOL2 format, chain E [A] MOL2 format, chain F [A] MOL2 format, chain G [A]	A	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Ligand Interaction
CA Query on CA Download Ideal Coordinates CCD File SDF format, chain I [A] MOL2 format, chain I [A]	A	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.55 Å
R-Value Free: 0.152
R-Value Work: 0.123
R-Value Observed: 0.125
Space Group: P 2₁ 3

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 120.29	α = 90
b = 120.29	β = 90
c = 120.29	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
XDS	data reduction
XSCALE	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2007-11-05
Released Date: 2008-12-16

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2008-12-16
Type: Initial release
Version 1.1: 2011-05-08
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.