2OCS

The crystal structure of the first PDZ domain of human NHERF-2 (SLC9A3R2)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.152 
  • R-Value Observed: 0.154 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

The crystal structure of the first PDZ domain of human NHERF-2 (SLC9A3R2)

Papagrigoriou, E.Phillips, C.Gileadi, C.Elkins, J.Salah, E.Berridge, G.Savitsky, P.Gorrec, F.Umeano, C.Ugochukwu, E.Gileadi, O.Burgess, N.Edwards, A.Arrowsmith, C.H.Weigelt, J.Sundstrom, M.Doyle, D.A.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Na(+)/H(+) exchange regulatory cofactor NHE-RF2 A88Homo sapiensMutation(s): 0 
Gene Names: SLC9A3R2NHERF2
Find proteins for Q15599 (Homo sapiens)
Explore Q15599 
Go to UniProtKB:  Q15599
NIH Common Fund Data Resources
PHAROS:  Q15599
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download Ideal Coordinates CCD File 
A
1,2-ETHANEDIOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
SCN
Query on SCN

Download Ideal Coordinates CCD File 
A
THIOCYANATE ION
C N S
ZMZDMBWJUHKJPS-UHFFFAOYSA-M
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.198 
  • R-Value Work: 0.152 
  • R-Value Observed: 0.154 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 26.556α = 90
b = 39.867β = 106.93
c = 37.278γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
CCP4data scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History 

Revision History 

  • Version 1.0: 2007-01-16
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance
  • Version 1.3: 2017-10-18
    Changes: Refinement description