Macromolecule Content

Total Structure Weight: 7.18 kDa
Atom Count: 487
Residue Count: 61
Unique protein chains: 1

2M3H

Structure of Dido PHD domain

DOI: 10.2210/pdb2M3H/pdb
BMRB: 18963

Classification: APOPTOSIS
Organism(s): Homo sapiens
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2013-01-19 Released: 2013-08-07
Deposition Author(s): Santiveri, C.M., Perez-Canadillas, J.M., Jimenez, M.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function

wwPDB Validation 3D Report Full Report

Literature

NMR structure note: PHD domain from death inducer obliterator protein and its interaction with H3K4me3.

Santiveri, C.M., Garcia-Mayoral, M.F., Perez-Canadillas, J.M., Jimenez, M.A.

(2013) J Biomol NMR 56: 183-190

PubMed: 23579637 Search on PubMed
DOI: 10.1007/s10858-013-9726-x
Primary Citation of Related Structures:
2M3H

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Death-inducer obliterator 1	A	61	Homo sapiens	Mutation(s): 0 Gene Names: DIDO1, C20orf158, DATF1, KIAA0333
Find proteins for Q9BTC0 (Homo sapiens) Explore Q9BTC0 Go to UniProtKB: Q9BTC0
NIH Common Fund Data Resources
PHAROS: Q9BTC0 GTEx: ENSG00000101191
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
ZN Query on ZN Download Ideal Coordinates CCD File SDF format, chain B [A] SDF format, chain C [A] MOL2 format, chain B [A] MOL2 format, chain C [A]	A	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Ligand Interaction

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: target function
OLDERADO: 2M3H Olderado

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2013-01-19
Released Date: 2013-08-07

Deposition Author(s):

Santiveri, C.M.

Perez-Canadillas, J.M.

Revision History

Version 1.0: 2013-08-07
Type: Initial release

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.