Macromolecule Content

Total Structure Weight: 19.78 kDa
Atom Count: 1382
Residue Count: 173
Unique protein chains: 1

2DDY

Solution Structure of Matrilysin (MMP-7) Complexed to Constraint Conformational Sulfonamide Inhibitor

DOI: 10.2210/pdb2DDY/pdb
BMRB: 6014

Classification: HYDROLASE
Organism(s): Homo sapiens
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2006-02-06 Released: 2007-02-06
Deposition Author(s): Zheng, X.H., Ou, L.

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 25
Selection Criteria: target function

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Solution Structure of Matrilysin (MMP-7) Complexed to Constraint Conformational Sulfonamide Inhibitor

Zheng, X.H., Ou, L., Zhang, Q., Wu, H.

To be published.

Macromolecules

Find similar proteins by:

(by identity cutoff) | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Matrilysin	A	173	Homo sapiens	Mutation(s): 0 Gene Names: MMP7, MPSL1, PUMP1 EC: 3.4.24.23
Find proteins for P09237 (Homo sapiens) Explore P09237 Go to UniProtKB: P09237
NIH Common Fund Data Resources
PHAROS: P09237 GTEx: ENSG00000137673
Protein Feature View Expand
Reference Sequence

Small Molecules

Ligands 3 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
MDW Query on MDW Download Ideal Coordinates CCD File SDF format, chain F [A] MOL2 format, chain F [A]	A	(1R)-N,6-DIHYDROXY-7-METHOXY-2-[(4-METHOXYPHENYL)SULFONYL]-1,2,3,4-TETRAHYDROISOQUINOLINE-1-CARBOXAMIDE C₁₈ H₂₀ N₂ O₇ S AYFCYVLVRYQGME-QGZVFWFLSA-N		Ligand Interaction
ZN Query on ZN Download Ideal Coordinates CCD File SDF format, chain D [A] SDF format, chain E [A] MOL2 format, chain D [A] MOL2 format, chain E [A]	A	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N		Ligand Interaction
CA Query on CA Download Ideal Coordinates CCD File SDF format, chain B [A] SDF format, chain C [A] MOL2 format, chain B [A] MOL2 format, chain C [A]	A	CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N		Ligand Interaction

External Ligand Annotations
ID	Binding Affinity (Sequence Identity %)
MDW	IC50: 3162 nM BindingDB
MDW	IC50: 3192 nM BindingDB

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 200
Conformers Submitted: 25
Selection Criteria: target function
OLDERADO: 2DDY Olderado

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Deposited Date: 2006-02-06
Released Date: 2007-02-06

Deposition Author(s):

Revision History

Version 1.0: 2007-02-06
Type: Initial release
Version 1.1: 2008-04-30
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance

RCSB PDB is funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.