Biological Assembly 1  

 3D View: Structure | Electron Density | Ligand Interaction

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 27.58 kDa 
• Atom Count: 1974 
• Residue Count: 233 
• Unique protein chains: 1

1ZPZ

Factor XI catalytic domain complexed with N-((R)-1-(4-bromophenyl)ethyl)urea-Asn-Val-Arg-alpha-ketothiazole

• DOI: 10.2210/pdb1ZPZ/pdb

• Classification: HYDROLASE
• Organism(s): Homo sapiens
• Expression System: Komagataella pastoris
• Mutation(s): Yes 


• Deposited: 2005-05-18 Released: 2006-05-09 
• Deposition Author(s): Lin, J., Deng, H., Jin, L., Prandey, P., Rynkiewicz, M.J., Bibbins, F., Cantin, S., Quinn, J., Magee, S., Gorga, J.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free: 0.272 
• R-Value Work: 0.221 

Literature

Design, Synthesis and Biological Evaluation of Peptidomimetic FXIa Inhibitors

Lin, J., Deng, H., Jin, L., Prandey, P., Rynkiewicz, M.J., Bibbins, F., Cantin, S., Quinn, J., Magee, S., Gorga, J.

To be published.

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Coagulation factor XI	A	238	Homo sapiens	Mutation(s): 2  Gene Names: F11 EC: 3.4.21.27
Find proteins for P03951 (Homo sapiens) Explore P03951  Go to UniProtKB:  P03951
NIH Common Fund Data Resources
PHAROS  P03951 GTEx  ENSG00000088926

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
BUK	A	N~2~-({[(1R)-1-(4-BROMOPHENYL)ETHYL]AMINO}CARBONYL)ASPARAGINYL-N~1~-{4-{[AMINO(IMINO)METHYL]AMINO}-1-[2,3-DIHYDRO-1,3-THIAZOL-2-YL(HYDROXY)METHYL]BUTYL}VALINAMIDE C27 H42 Br N9 O5 S JOESWSPHHQIQBV-JJYDKGGZSA-N
SO4	A	SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free: 0.272 
• R-Value Work: 0.221 
• Space Group: P 3₂

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 41.937	α = 90
b = 41.937	β = 90
c = 103.872	γ = 120

Software Package:

Software Name	Purpose
CNX	refinement
HKL-2000	data reduction
SCALEPACK	data scaling
AMoRE	phasing

Structure Validation

Entry History 

Deposition Data

• Deposited Date: 2005-05-18 
• Released Date: 2006-05-09 
Deposition Author(s): Lin, J., Deng, H., Jin, L., Prandey, P., Rynkiewicz, M.J., Bibbins, F., Cantin, S., Quinn, J., Magee, S., Gorga, J.

Revision History 

• Version 1.0: 2006-05-09
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance