1SVA

SIMIAN VIRUS 40


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.10 Å
  • R-Value Free: 0.268 
  • R-Value Work: 0.257 
  • R-Value Observed: 0.257 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

The structure of simian virus 40 refined at 3.1 A resolution.

Stehle, T.Gamblin, S.J.Yan, Y.Harrison, S.C.

(1996) Structure 4: 165-182

  • DOI: 10.1016/s0969-2126(96)00020-2
  • Primary Citation of Related Structures:  
    1SVA

  • PubMed Abstract: 
  • The structure of simian virus 40 (SV40), previously determined at 3.8 degree resolution, shows how its pentameric VP1 assembly units are tied together by extended C-terminal arms. In order to define more precisely the possible assembly mechanisms, we hav ...

    The structure of simian virus 40 (SV40), previously determined at 3.8 degree resolution, shows how its pentameric VP1 assembly units are tied together by extended C-terminal arms. In order to define more precisely the possible assembly mechanisms, we have refined the structure at 3.1 degree resolution.


    Related Citations: 
    • Structure of Simian Virus 40 at 3.8-A Resolution
      Liddington, R.C., Yan, Y., Moulai, J., Sahli, R., Benjamin, T.L., Harrison, S.C.
      (1991) Nature 354: 278

    Organizational Affiliation

    Howard Hughes Medical Institute and Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
SIMIAN VIRUS 40 123456361Macaca mulatta polyomavirus 1Mutation(s): 0 
Find proteins for P03087 (Simian virus 40)
Explore P03087 
Go to UniProtKB:  P03087
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.10 Å
  • R-Value Free: 0.268 
  • R-Value Work: 0.257 
  • R-Value Observed: 0.257 
  • Space Group: I 2 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 558α = 90
b = 558β = 90
c = 558γ = 90
Software Package:
Software NamePurpose
X-PLORmodel building
X-PLORrefinement
X-PLORphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1996-06-10
    Type: Initial release
  • Version 1.1: 2008-03-24
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance