1NAG

CREVICE-FORMING MUTANTS IN THE RIGID CORE OF BOVINE PANCREATIC TRYPSIN INHIBITOR: CRYSTAL STRUCTURES OF F22A, Y23A, N43G, AND F45A


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Work: 0.163 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crevice-forming mutants in the rigid core of bovine pancreatic trypsin inhibitor: crystal structures of F22A, Y23A, N43G, and F45A.

Danishefsky, A.T.Housset, D.Kim, K.S.Tao, F.Fuchs, J.Woodward, C.Wlodawer, A.

(1993) Protein Sci. 2: 577-587

  • DOI: 10.1002/pro.5560020409
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • Crystal structures of four mutants of bovine pancreatic trypsin inhibitor (F22A, Y23A, N43G, and F45A), engineered to alter their stability properties, have been determined. The mutated residues, which are highly conserved among Kunitz-type inhibitor ...

    Crystal structures of four mutants of bovine pancreatic trypsin inhibitor (F22A, Y23A, N43G, and F45A), engineered to alter their stability properties, have been determined. The mutated residues, which are highly conserved among Kunitz-type inhibitors, are located in the rigid core of the molecule. Replacement of the partially buried bulky residues of the wild-type protein with smaller residues resulted in crevices open to the exterior of the molecule. The overall three-dimensional structure of these mutants is very similar to that of the wild-type protein and only small rearrangements are observed among the atoms lining the crevices.


    Related Citations: 
    • Pancreatic Trypsin Inhibitor. A New Crystal Form and its Analysis
      Walter, J.,Huber, R.
      (1983) J.Mol.Biol. 167: 911
    • X-Ray Crystal Structure of the Protease Inhibitor Domain of Alzheimer'S Amyloid Beta-Protein Precursor
      Hynes, T.R.,Randal, M.,Kennedy, L.A.,Eigenbrot, C.,Kossiakoff, A.A.
      (1990) Biochemistry 29: 10018
    • Structural Effects Induced by Removal of a Disulfide-Bridge. The X-Ray Structure of the C30A(Slash)C51A Mutant of Basic Pancreatic Trypsin Inhibitor at 1.6 Angstroms
      Eigenbrot, C.,Randal, M.,Kossiakoff, A.A.
      (1990) Protein Eng. 3: 591
    • Crevice-Forming Mutants of Bovine Pancreatic Trypsin Inhibitor: Stability Changes and New Hydrophobic Surface
      Tao, K.-S.Kim.F.,Fuchs, J.,Danishefsky, A.T.,Housset, D.,Wlodawer, A.,Woodward, C.
      (1993) Protein Sci. 2: 588
    • Comparison of Two Highly Refined Structures of Bovine Pancreatic Trypsin Inhibitor
      Wlodawer, A.,Deisenhofer, J.,Huber, R.
      (1987) J.Mol.Biol. 193: 145
    • Crystal Structure of a Y35G Mutant of Bovine Pancreatic Trypsin Inhibitor
      Housset, D.,Kim, K.-S.,Fuchs, J.,Woodward, C.,Wlodawer, A.
      (1991) J.Mol.Biol. 220: 757
    • Structure of Bovine Pancreatic Trypsin Inhibitor. Results of Joint Neutron and X-Ray Refinement of Crystal Form II
      Wlodawer, A.,Walter, J.,Huber, R.,Sjolin, L.
      (1984) J.Mol.Biol. 180: 301
    • Structure of Form III Crystals of Bovine Pancreatic Trypsin Inhibitor
      Wlodawer, A.,Nachman, J.,Gilliland, G.L.,Gallagher, W.,Woodward, C.
      (1987) J.Mol.Biol. 198: 469


    Organizational Affiliation

    Macromolecular Structure Laboratory, NCI-Frederick Cancer Research and Development Center, ABL, Basic Research Program, Maryland 21702.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
BOVINE PANCREATIC TRYPSIN INHIBITOR
A
58Bos taurus
Find proteins for P00974 (Bos taurus)
Go to UniProtKB:  P00974
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PO4
Query on PO4

Download SDF File 
Download CCD File 
A
PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Work: 0.163 
  • Space Group: P 21 21 2
Unit Cell:
Length (Å)Angle (°)
a = 55.720α = 90.00
b = 37.980β = 90.00
c = 23.790γ = 90.00
Software Package:
Software NamePurpose
X-PLORrefinement
PROLSQrefinement
X-PLORphasing
X-PLORmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1993-10-31
    Type: Initial release
  • Version 1.1: 2008-03-24
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance