1LQL

Crystal structure of OsmC like protein from Mycoplasma pneumoniae

PDB DOI: https://doi.org/10.2210/pdb1LQL/pdb

Classification: UNKNOWN FUNCTION
Organism(s): Mycoplasmoides pneumoniae
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2002-05-10 Released: 2003-08-05
Deposition Author(s): Choi, I.-G., Shin, D.H., Brandsen, J., Jancarik, J., Kim, R., Yokota, H., Kim, S.-H., Berkeley Structural Genomics Center (BSGC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.85 Å
R-Value Free: 0.276
R-Value Work: 0.217
R-Value Observed: 0.219

wwPDB Validation 3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Crystal structure of a stress inducible protein from Mycoplasma pneumoniae at 2.85 A resolution

Choi, I.-G., Shin, D.H., Brandsen, J., Jancarik, J., Busso, D., Yokota, H., Kim, R., Kim, S.-H.

(2003) J Struct Funct Genomics 4: 31-34

PubMed: 12943365 Search on PubMed
DOI: https://doi.org/10.1023/a:1024625122089
Primary Citation of Related Structures:
1LQL

Organizational Affiliation

Department of Chemistry, University of California, Berkeley, California 94720-5230, USA.

Macromolecule Content

Total Structure Weight: 184.74 kDa
Atom Count: 11,257
Modelled Residue Count: 1,432
Deposited Residue Count: 1,660
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
osmotical inducible protein C like family	A, B, C, D, E A, B, C, D, E, F, G, H, I, J	166	Mycoplasmoides pneumoniae	Mutation(s): 0
UniProt
Find proteins for P75170 (Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)) Explore P75170 Go to UniProtKB: P75170
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P75170
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.85 Å
R-Value Free: 0.276
R-Value Work: 0.217
R-Value Observed: 0.219
Space Group: P 2₁ 2₁ 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 66.36	α = 90
b = 95.6	β = 90
c = 308.48	γ = 90

Software Package:

Software Name	Purpose
HKL-2000	data collection
SCALEPACK	data scaling
SHARP	phasing
CNS	refinement
HKL-2000	data reduction

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2003-08-05

Deposition Author(s):

Berkeley Structural Genomics Center (BSGC)

Revision History (Full details and data files)

Version 1.0: 2003-08-05
Type: Initial release
Version 1.1: 2008-04-28
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.