Download MendeleyAtomic Structure of the Rapamycin Human Immunophilin Fkbp-12 Complex
Van Duyne, G.D., Standaert, R.F., Schreiber, S.L., Clardy, J.(1991) J Am Chem Soc 113: 7433
1FKB
ATOMIC STRUCTURE OF THE RAPAMYCIN HUMAN IMMUNOPHILIN FKBP-12 COMPLEX
- DOI: 10.2210/pdb1FKB/pdb
- Classification: ISOMERASE
- Organism(s): Homo sapiens
- Mutation(s): No
- Deposited: 1992-07-02 Released: 1993-10-31
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Work: 0.165
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
Macromolecules
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(by identity cutoff) | Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| FK506 BINDING PROTEIN | A | 107 | Homo sapiens | Mutation(s): 0 Gene Names: FKBP1A, FKBP1, FKBP12 EC: 5.2.1.8 |  |
Find proteins for P62942 (Homo sapiens) Explore P62942 Go to UniProtKB: P62942 | |||||
NIH Common Fund Data Resources | |||||
PHAROS: P62942 GTEx: ENSG00000088832 | |||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| RAP Query on RAP | A | RAPAMYCIN IMMUNOSUPPRESSANT DRUG C51 H79 N O13 QFJCIRLUMZQUOT-HPLJOQBZSA-N |  | Ligand Interaction | |
| External Ligand Annotations | |
|---|---|
| ID | Binding Affinity (Sequence Identity %) |
| RAP | IC50: 0.6000000238418579 nM BindingDB |
| RAP | IC50: 0.44999998807907104 nM BindingDB |
| RAP | EC50: 30 nM BindingDB |
| RAP | Ki: 1 nM BindingDB |
| RAP | IC50: 1.100000023841858 nM BindingDB |
| RAP | Ki: 0.20000000298023224 nM BindingDB |
| RAP | Kd: 0.20000000298023224 nM Binding MOAD |
| RAP | Kd : 0.20000000298023224 nM PDBBind |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Work: 0.165
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 45.42 | α = 90 |
| b = 49.16 | β = 90 |
| c = 54.74 | γ = 90 |
| Software Name | Purpose |
|---|---|
| MERLOT | phasing |
| X-PLOR | model building |
| X-PLOR | refinement |
| X-PLOR | phasing |
Entry History
Deposition Data
- Deposited Date: 1992-07-02
- Released Date: 1993-10-31 Deposition Author(s): Van Duyne, G.D., Standaert, R.F., Schreiber, S.L., Clardy, J.C.
