1A7Y

CRYSTAL STRUCTURE OF ACTINOMYCIN D


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.94 Å
  • R-Value Free: 0.068 

wwPDB Validation 3D Report Full Report


This is version 1.5 of the entry. See complete history

Literature

Crystal Structures of Actinomycin D and Actinomycin Z3

Schaefer, M.Sheldrick, G.M.Bahner, I.Lackner, H.

(1998) Angew.Chem.Int.Ed.Engl. 37: 2381


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
ACTINOMYCIN D
A, B, C
11N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MOH
Query on MOH

Download SDF File 
Download CCD File 
C
METHANOL
C H4 O
OKKJLVBELUTLKV-UHFFFAOYSA-N
 Ligand Interaction
EEE
Query on EEE

Download SDF File 
Download CCD File 
A, C
ETHYL ACETATE
C4 H8 O2
XEKOWRVHYACXOJ-UHFFFAOYSA-N
 Ligand Interaction
Biologically Interesting Molecules 1 Unique
IDChainsNameType/Class2D Diagram3D Interactions
PRD_000001
Query on PRD_000001
A,B,CActinomycin DPolypeptide / Antibiotic

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Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.94 Å
  • R-Value Free: 0.068 
  • Space Group: P 1
Unit Cell:
Length (Å)Angle (°)
a = 15.737α = 85.93
b = 15.887β = 86.19
c = 25.156γ = 69.86
Software Package:
Software NamePurpose
SHELXL-97model building
SAINTdata reduction
SHELXL-97refinement
SHELXL-97phasing
SADABSdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1999-03-23
    Type: Initial release
  • Version 1.1: 2011-06-14
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2011-07-27
    Type: Atomic model, Database references, Derived calculations, Non-polymer description, Structure summary
  • Version 1.4: 2012-12-12
    Type: Other
  • Version 1.5: 2018-03-07
    Type: Advisory, Data collection, Other