5V0S

Crystal structure of the ACT domain of prephenate dehydrogenase tyrA from Bacillus anthracis


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.01 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.171

Literature

Macromolecules
Sequence Display for 5V0S

Classification: OXIDOREDUCTASE

Total Structure Weight: 16034.08

Macromolecule Entities
Molecule Chains Length Organism Details
Prephenate dehydrogenase A, B 69 Bacillus anthracis EC#: 1.3.1.12 IUBMB
Fragment: unp residues 307-375
Gene Name(s): tyrA GBAA_2954 BASH2_02940
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 48.07 α = 90.00
b = 48.07 β = 90.00
c = 233.40 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2017-02-28
  • Released Date: 2017-03-08
  • Deposition author(s): Shabalin, I.G., Hou, J., Cymborowski, M.T., Otwinowski, Z., Kwon, K., Christendat, D., Gritsunov, A., Anderson, W.F., Minor, W., Center for Structural Genomics of Infectious Diseases (CSGID)

Revision History

  • 2017-09-20
    Type: Author supporting evidence, Refinement description