4QIL

Crystal structure of the ROQ domain of human Roquin in complex with the Hmg19 stem-loop RNA

Structural Biology Knowledgebase: 4QIL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.195

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4QIL

Classification: RNA BINDING PROTEIN / RNA

Total Structure Weight: 86651.10


Macromolecule Entities
Molecule Chains Length Organism Details
Roquin-1 A, B 330 Homo sapiens Fragment: ROQ domain (UNP residues 88-407)
Gene Name(s): RC3H1 Gene View KIAA2025 RNF198
Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*CP*UP*CP*CP*CP*UP*UP*CP*UP*GP*UP*GP*AP*AP*GP*GP*GP*GP*A)-3' C, D 19 synthetic Hmgxb3 mRNA (Hmg19)

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.251
  • R-Value Work: 0.195
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 49.60 α = 90.00
b = 170.00 β = 97.00
c = 51.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-05-31
  • Released Date: 2014-07-16
  • Deposition author(s): Tan, D., Tong, L.

Revision History

  • 2014-08-20
    Type: Citation | Details: Citation update
  • 2014-07-30
    Type: Citation | Details: Citation update