Crystal structure of the E. coli thiM riboswitch in complex with thiamine
DOI:10.2210/pdb4nyg/pdb   NDB ID: NA2830
4NYG
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: RNA
    Structure Weight: 27272.28
    Molecule: thiM TPP riboswitch
    Polymer: 1 Type: rna Length: 83
    Chains: A
    Organism: Escherichia coli
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct (Escherichia coli)   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    4NYA   Crystal structure of the E. coli thiM riboswitch in complex with 5-(azidomethyl)-2-methylpyrimidin-4-amine 
    4NYB   Crystal structure of the E. coli thiM riboswitch in complex with (4-(1,2,3-thiadiazol-4-yl)phenyl)methanamine 
    4NYC   Crystal structure of the E. coli thiM riboswitch in complex with thieno[2,3-b]pyrazin-7-amine 
    4NYD   Crystal structure of the E. coli thiM riboswitch in complex with hypoxanthine 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MG
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    MG Mg
    MAGNESIUM ION
    VIB
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    VIB C12 H17 N4 O S
    3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)- 5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM
    VIB:4NYG
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    A23
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    A23 C10 H13 N5 O9 P2 A rnaLinking
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:NA2830
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
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