3REP

Crystal structure of the ILK/alpha-parvin core complex (MnATP)

Structural Biology Knowledgebase: 3REP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.204

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3REP

Classification: CELL ADHESION

Total Structure Weight: 46377.52

Macromolecule Entities
Molecule Chains Length Organism Details
Integrin-linked kinase A 271 Homo sapiens EC#: 2.7.11.1 IUBMB
Fragment: Pseudokinase domain, UNP residues 182-452
Mutation: C346S, C422S
Gene Name(s): ILK Gene View ILK1 ILK2
Alpha-parvin B 129 Homo sapiens Fragment: Calponin homology domain, UNP residues 248-372
Gene Name(s): PARVA Gene View MXRA2

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATP
Query on ATP

A ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.204
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 44.02 α = 90.00
b = 116.28 β = 101.53
c = 47.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-04-04
  • Released Date: 2011-04-27
  • Deposition author(s): Fukuda, K., Qin, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4