3EPC

CryoEM structure of poliovirus receptor bound to poliovirus type 1

Structural Biology Knowledgebase: 3EPC SBKB.org


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 8.0 Å
  • Reconstruction Method: n/a

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3EPC

Classification: VIRAL PROTEIN [ VIPERdb ]

Total Structure Weight: 118607.03

Macromolecule Entities
Molecule Chains Length Organism Details
Poliovirus receptor R 213 Homo sapiens Fragment: Poliovirus receptor CD155 D1D2
Mutation: N105D, N120S, N188Q, N218Q, N237S
Gene Name(s): PVR Gene View PVS
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Protein VP1 1 283 Enterovirus c Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Protein VP2 2 268 Enterovirus c Gene Name(s):
Protein VP4 4 68 Enterovirus c Gene Name(s):
Protein VP3 3 235 Enterovirus c Mutation: F123S
Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SPH
Query on SPH

1 SPHINGOSINE
C18 H37 N O2
WWUZIQQURGPMPG-MSOLQXFVSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MYR
Query on MYR

4 MYRISTIC ACID
C14 H28 O2
TUNFSRHWOTWDNC-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 8.0 Å
  • Reconstruction Method: n/a

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-09-29
  • Released Date: 2008-11-11
  • Deposition author(s): Zhang, P., Mueller, S., Morais, M.C., Bator, C.M., Bowman, V.D., Hafenstein, S., Wimmer, E., Rossmann, M.G.

Revision History

  • 2016-05-11
    Type: Biological assembly | Details: corrected biological assembly
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4