Glycoprotein B from Herpes simplex virus type 1, W174R mutant, low-pH
Primary Citation
  •   Molecular Description Hide
    Classification: Viral Protein
    Structure Weight: 316875.45
    Molecule: Envelope glycoprotein B
    Polymer: 1 Type: protein Length: 703
    Chains: A, B, C, D
    Fragment: Ectodomain (UNP residues 30 to 730)
    Mutation: LEU:D.443, SER:D.313, ARG:D.174, ALA:D.58, LEU:C.443, SER:C.313, ARG:C.174, ALA:C.58, ALA:B.58 ...
    Organism: Human herpesvirus 1 strain KOS
    Gene Names: gB UL27
    UniProtKB: Search PDB | P06437   Protein Feature View
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  • MolProbity Ramachandran Plot

  •   Related Citations in PDB Entry (REMARK 1) Hide
  •   Source Hide
    Polymer: 1
    Scientific Name: Human herpesvirus 1   Taxonomy   Common Name: Hhv-1 Expression System: Spodoptera frugiperda  
  •   Related PDB Entries Hide
    Identifier Details
    2GUM   wt hsv-1 glycoprotein B ectodomain at pH 7.5, trypsin-cut 
    3NW8   hsv-1 glycoprotein B ectodomain at pH 8.5, Y179S mutation 
    3NWD   hsv-1 glycoprotein B ectodomain at pH 5.5, Y179S mutation 
    3NWF   hsv-1 glycoprotein B ectodomain at pH 5.5 
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    MRY C4 H10 O4
    NAG C8 H15 N O6
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  •   Structural Biology Knowledgebase Data Hide
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Stampfer, S.D.,  Lou, H.,  Cohen, G.H.,  Eisenberg, R.J.,  Heldwein, E.E.

    Deposition:   2010-07-09
    Release:   2010-12-01
    Last Modified (REVDAT):   2011-01-12
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  •   Experimental Details Hide
    Exp. Data:
      Structure Factors
    Resolution[Å]:   2.26
    R-Value: 0.176 (obs.)
    R-Free: 0.227
    Space Group: P 3
    Unit Cell:
      Length [Å] Angles [°]
    a = 117.09 α = 90.00 
    b = 117.09 β = 90.00 
    c = 321.38 γ = 120.00