2HTO

Ruthenium hexammine ion interactions with Z-DNA

Structural Biology Knowledgebase: 2HTO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.54 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.189

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2HTO

Classification: DNA

Total Structure Weight: 3822.70

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*DCP*DGP*DCP*DGP*DCP*DA)-3') A 6 synthetic
DNA (5'-D(*DTP*DGP*DCP*DGP*DCP*DG)-3') B 6 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NRU
Query on NRU

A RUTHENIUM (III) HEXAAMINE ION
HEXAAMINORUTHENIUM (Synonym)
H18 N6 Ru
HOOVQFBYNWLMGV-OVMAVDMRAY
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.54 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.189
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 17.95 α = 90.00
b = 30.82 β = 90.00
c = 44.60 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2006-07-26
  • Released Date: 2006-08-08
  • Deposition author(s): Bharanidharan, D., Thiyagarajan, S., Gautham, N.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4